RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PIK3CBP42338 1070 aa2.54□□□□□ -2
CDC40-204ENST00000431461 MMP13P45452 471 aa2.54□□□□□ -2
CDC40-204ENST00000431461 PRIM2P49643 509 aa2.54□□□□□ -2
CDC40-204ENST00000431461 NEK3P51956 506 aa2.54□□□□□ -2
CDC40-204ENST00000431461 DGKQP52824 942 aa2.54□□□□□ -2
CDC40-204ENST00000431461 TPTEP56180 551 aa2.54□□□□□ -2
CDC40-204ENST00000431461 RHBDL3P58872 404 aa2.54□□□□□ -2
CDC40-204ENST00000431461 MC2RQ01718 297 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ICA1Q05084 483 aa2.54□□□□□ -2
CDC40-204ENST00000431461 MYO1EQ12965 1108 aa2.54□□□□□ -2
CDC40-204ENST00000431461 DAZAP2Q15038 168 aaPredicted RBP2.54□□□□□ -2
CDC40-204ENST00000431461 TRIP6Q15654 476 aaKnown RBP2.54□□□□□ -2
CDC40-204ENST00000431461 RBM20Q5T481 1227 aaKnown RBP2.54□□□□□ -2
CDC40-204ENST00000431461 SYCP2LQ5T4T6 812 aa2.54□□□□□ -2
CDC40-204ENST00000431461 PRAMEF17Q5VTA0 474 aa2.54□□□□□ -2
CDC40-204ENST00000431461 DCAF12L1Q5VU92 463 aa2.54□□□□□ -2
CDC40-204ENST00000431461 IL31Q6EBC2 164 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ANKRD16Q6P6B7 361 aa2.54□□□□□ -2
CDC40-204ENST00000431461 TLDC1Q6P9B6 456 aa2.54□□□□□ -2
CDC40-204ENST00000431461 FBXO38Q6PIJ6 1188 aa2.54□□□□□ -2
CDC40-204ENST00000431461 RFX8Q6ZV50 586 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ZNF551Q7Z340 670 aaPredicted RBP2.54□□□□□ -2
CDC40-204ENST00000431461 MORC1Q86VD1 984 aa2.54□□□□□ -2
CDC40-204ENST00000431461 SESTD1Q86VW0 696 aa2.54□□□□□ -2
CDC40-204ENST00000431461 CNGA4Q8IV77 575 aa2.54□□□□□ -2
CDC40-204ENST00000431461 NSUN7Q8NE18 718 aaKnown RBP2.54□□□□□ -2
CDC40-204ENST00000431461 MORC4Q8TE76 937 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ABHD5Q8WTS1 349 aa2.54□□□□□ -2
CDC40-204ENST00000431461 OSCP1Q8WVF1 389 aa2.54□□□□□ -2
CDC40-204ENST00000431461 TBC1D5Q92609 795 aa2.54□□□□□ -2
CDC40-204ENST00000431461 RSC1A1Q92681 617 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ZNF566Q969W8 418 aa2.54□□□□□ -2
CDC40-204ENST00000431461 FKBP10Q96AY3 582 aa2.54□□□□□ -2
CDC40-204ENST00000431461 SGCZQ96LD1 299 aa2.54□□□□□ -2
CDC40-204ENST00000431461 RIPOR3Q96MK2 946 aa2.54□□□□□ -2
CDC40-204ENST00000431461 NT5C1BQ96P26 610 aa2.54□□□□□ -2
CDC40-204ENST00000431461 TBCBQ99426 244 aa2.54□□□□□ -2
CDC40-204ENST00000431461 MPHOSPH6Q99547 160 aaKnown RBP2.54□□□□□ -2
CDC40-204ENST00000431461 NUDT22Q9BRQ3 303 aa2.54□□□□□ -2
CDC40-204ENST00000431461 STK31Q9BXU1 1019 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ACTRT3Q9BYD9 372 aa2.54□□□□□ -2
CDC40-204ENST00000431461 AMBRA1Q9C0C7 1298 aa2.54□□□□□ -2
CDC40-204ENST00000431461 PRSS22Q9GZN4 317 aa2.54□□□□□ -2
CDC40-204ENST00000431461 VPS16Q9H269 839 aa2.54□□□□□ -2
CDC40-204ENST00000431461 CHST8Q9H2A9 424 aa2.54□□□□□ -2
CDC40-204ENST00000431461 GLOD4Q9HC38 313 aa2.54□□□□□ -2
CDC40-204ENST00000431461 PLCB1Q9NQ66 1216 aa2.54□□□□□ -2
CDC40-204ENST00000431461 SNX15Q9NRS6 342 aa2.54□□□□□ -2
CDC40-204ENST00000431461 HELLSQ9NRZ9 838 aa2.54□□□□□ -2
CDC40-204ENST00000431461 STK32BQ9NY57 414 aa2.54□□□□□ -2
CDC40-204ENST00000431461 DNAJB11Q9UBS4 358 aa2.54□□□□□ -2
CDC40-204ENST00000431461 NDRG4Q9ULP0 352 aaKnown RBP2.54□□□□□ -2
CDC40-204ENST00000431461 MAFFQ9ULX9 164 aa2.54□□□□□ -2
CDC40-204ENST00000431461 USP22Q9UPT9 525 aa2.54□□□□□ -2
CDC40-204ENST00000431461 CORO2BQ9UQ03 480 aa2.54□□□□□ -2
CDC40-204ENST00000431461 CDY1Q9Y6F8 540 aa2.54□□□□□ -2
CDC40-204ENST00000431461 hCG_1642624A0A1W2PR95 340 aa2.53□□□□□ -2
CDC40-204ENST00000431461 GOLGA6L3A6NEY3 463 aa2.53□□□□□ -2
CDC40-204ENST00000431461 A8MVJ9 347 aa2.53□□□□□ -2
CDC40-204ENST00000431461 ZNF213O14771 459 aa2.53□□□□□ -2
CDC40-204ENST00000431461 KPNA5O15131 536 aa2.53□□□□□ -2
CDC40-204ENST00000431461 KCNQ3O43525 872 aa2.53□□□□□ -2
CDC40-204ENST00000431461 VPS4BO75351 444 aa2.53□□□□□ -2
CDC40-204ENST00000431461 SKAP2O75563 359 aaPredicted RBP2.53□□□□□ -2
CDC40-204ENST00000431461 TJP3O95049 919 aa2.53□□□□□ -2
CDC40-204ENST00000431461 RASAL1O95294 804 aa2.53□□□□□ -2
CDC40-204ENST00000431461 A1BGP04217 495 aa2.53□□□□□ -2
CDC40-204ENST00000431461 JUPP14923 745 aa2.53□□□□□ -2
CDC40-204ENST00000431461 BTF3P20290 206 aaKnown RBP2.53□□□□□ -2
CDC40-204ENST00000431461 KCNA3P22001 575 aa2.53□□□□□ -2
CDC40-204ENST00000431461 EEF1GP26641 437 aaKnown RBP2.53□□□□□ -2
CDC40-204ENST00000431461 PTDSS1P48651 473 aaKnown RBP2.53□□□□□ -2
CDC40-204ENST00000431461 LILRA4P59901 499 aa2.53□□□□□ -2
CDC40-204ENST00000431461 KRTAP10-5P60370 271 aa2.53□□□□□ -2
CDC40-204ENST00000431461 NSUN2Q08J23 767 aaKnown RBP eCLIP2.53□□□□□ -2
CDC40-204ENST00000431461 STARD3Q14849 445 aa2.53□□□□□ -2
CDC40-204ENST00000431461 ZRSR2Q15696 482 aaKnown RBP2.53□□□□□ -2
CDC40-204ENST00000431461 ZNF750Q32MQ0 723 aa2.53□□□□□ -2
CDC40-204ENST00000431461 C3orf38Q5JPI3 329 aa2.53□□□□□ -2
CDC40-204ENST00000431461 FAM209BQ5JX69 171 aa2.53□□□□□ -2
CDC40-204ENST00000431461 GORABQ5T7V8 394 aa2.53□□□□□ -2
CDC40-204ENST00000431461 ARHGAP40Q5TG30 622 aa2.53□□□□□ -2
CDC40-204ENST00000431461 FAXCQ5TGI0 409 aa2.53□□□□□ -2
CDC40-204ENST00000431461 CACHD1Q5VU97 1274 aa2.53□□□□□ -2
CDC40-204ENST00000431461 RGS7BPQ6MZT1 257 aaPredicted RBP2.53□□□□□ -2
CDC40-204ENST00000431461 C1orf228Q6PIY5 440 aa2.53□□□□□ -2
CDC40-204ENST00000431461 SLC30A10Q6XR72 485 aa2.53□□□□□ -2
CDC40-204ENST00000431461 UNC13DQ70J99 1090 aa2.53□□□□□ -2
CDC40-204ENST00000431461 GATAD2AQ86YP4 633 aa2.53□□□□□ -2
CDC40-204ENST00000431461 SYTL1Q8IYJ3 562 aa2.53□□□□□ -2
CDC40-204ENST00000431461 TXLNBQ8N3L3 684 aa2.53□□□□□ -2
CDC40-204ENST00000431461 GALNT16Q8N428 558 aa2.53□□□□□ -2
CDC40-204ENST00000431461 OR56A3Q8NH54 315 aa2.53□□□□□ -2
CDC40-204ENST00000431461 MBD3L2Q8NHZ7 208 aaPredicted RBP2.53□□□□□ -2
CDC40-204ENST00000431461 BPIFB1Q8TDL5 484 aa2.53□□□□□ -2
CDC40-204ENST00000431461 MAML1Q92585 1016 aa2.53□□□□□ -2
CDC40-204ENST00000431461 TRIM63Q969Q1 353 aa2.53□□□□□ -2
CDC40-204ENST00000431461 VPS50Q96JG6 964 aa2.53□□□□□ -2
CDC40-204ENST00000431461 FAM227BQ96M60 508 aa2.53□□□□□ -2
CDC40-204ENST00000431461 PPP1R10Q96QC0 940 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms