RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SSTR3P32745 418 aaPredicted RBP15.67■□□□□ 0.1
GARNL3-204ENST00000429629 NSFP46459 744 aaKnown RBP15.67■□□□□ 0.1
GARNL3-204ENST00000429629 PGFP49763 221 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 KPNA1P52294 538 aaPredicted RBP15.67■□□□□ 0.1
GARNL3-204ENST00000429629 COG7P83436 770 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 SLC6A3Q01959 620 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
GARNL3-204ENST00000429629 NAA35Q5VZE5 725 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 MSANTD2Q6P1R3 559 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 SLC26A9Q7LBE3 791 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 UBALD2Q8IYN6 164 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 OLIG1Q8TAK6 271 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 CPA5Q8WXQ8 436 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 USP13Q92995 863 aaPredicted RBP15.67■□□□□ 0.1
GARNL3-204ENST00000429629 SLC22A12Q96S37 553 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 CYP2S1Q96SQ9 504 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 SYNCQ9H7C4 482 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 POPDC2Q9HBU9 364 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 RRN3Q9NYV6 651 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 SORCS3Q9UPU3 1222 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 NUMBLQ9Y6R0 609 aa15.67■□□□□ 0.1
GARNL3-204ENST00000429629 PTPRDP23468 1912 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 HEPACAM2A8MVW5 462 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 HSF2BPO75031 334 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 CALB1P05937 261 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 MLLT6P55198 1093 aaPredicted RBP15.66■□□□□ 0.1
GARNL3-204ENST00000429629 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
GARNL3-204ENST00000429629 OLFML1Q6UWY5 402 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 TMC6Q7Z403 805 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 BPIFB1Q8TDL5 484 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 KHSRPQ92945 711 aaKnown RBP eCLIP15.66■□□□□ 0.1
GARNL3-204ENST00000429629 TRMT61BQ9BVS5 477 aaKnown RBP15.66■□□□□ 0.1
GARNL3-204ENST00000429629 ISCUQ9H1K1 167 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 CCSER2Q9H7U1 834 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 TRPC7Q9HCX4 862 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 CD320Q9NPF0 282 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 SLC2A4RGQ9NR83 387 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 ABHD10Q9NUJ1 306 aa15.66■□□□□ 0.1
GARNL3-204ENST00000429629 THG1LQ9NWX6 298 aaKnown RBP15.66■□□□□ 0.1
GARNL3-204ENST00000429629 NOTCH4Q99466 2003 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 E2F8A0AVK6 867 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 DDX3XO00571 662 aaKnown RBP eCLIP15.65■□□□□ 0.1
GARNL3-204ENST00000429629 CHADO15335 359 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 PRAMEF12O95522 483 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 ADCY5O95622 1261 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 ERBB2P04626 1255 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 FYNP06241 537 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 SKILP12757 684 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 VIPR2P41587 438 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 GOLGA8FQ08AF8 430 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 GOLGA8DPQ0D2H9 430 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 PTP4A2Q12974 167 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 NNTQ13423 1086 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 ARHGAP29Q52LW3 1261 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 C10orf120Q5SQS8 335 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 WDR59Q6PJI9 974 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 VITQ6UXI7 678 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 XYLT1Q86Y38 959 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 RNF139Q8WU17 664 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 ZFRQ96KR1 1074 aaKnown RBP15.65■□□□□ 0.1
GARNL3-204ENST00000429629 SLC2A13Q96QE2 648 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 KLF16Q9BXK1 252 aaPredicted RBP15.65■□□□□ 0.1
GARNL3-204ENST00000429629 ADAM22Q9P0K1 906 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
GARNL3-204ENST00000429629 HBS1LQ9Y450 684 aaKnown RBP15.65■□□□□ 0.1
GARNL3-204ENST00000429629 GOLGA6L3A6NEY3 463 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 SLC9A3R1O14745 358 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 RTN2O75298 545 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 TBX18O95935 607 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 MBL2P11226 248 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 SRFP11831 508 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 SP100P23497 879 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 PFKPQ01813 784 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 USP4Q13107 963 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 MTA1Q13330 715 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 ZNF77Q15935 545 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 ASTE1Q2TB18 679 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 TDRD12Q587J7 1177 aaKnown RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 OR6B2Q6IFH4 312 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 HTR3DQ70Z44 454 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 MON1BQ7L1V2 547 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 RSRC2Q7L4I2 434 aaKnown RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 TC2NQ8N9U0 490 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 SH3RF2Q8TEC5 729 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 CLEC4CQ8WTT0 213 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 NDRG1Q92597 394 aaKnown RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 IRF7Q92985 503 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 OTUB2Q96DC9 234 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 TRIM11Q96F44 468 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 LRRC3BQ96PB8 259 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 PANX2Q96RD6 677 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 RPP25Q9BUL9 199 aaKnown RBP15.64■□□□□ 0.09
GARNL3-204ENST00000429629 PLA2G2FQ9BZM2 168 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 NACA2Q9H009 215 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 MARCH2Q9P0N8 246 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 TBC1D14Q9P2M4 693 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 ADAMTS1Q9UHI8 967 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 DUSP12Q9UNI6 340 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 ZNF510Q9Y2H8 683 aa15.64■□□□□ 0.09
GARNL3-204ENST00000429629 CPQQ9Y646 472 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms