RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 WSCD1Q658N2 575 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 GDF6Q6KF10 455 aaPredicted RBP16.89■□□□□ 0.29
MBD4-203ENST00000429544 YTHDF3Q7Z739 585 aaKnown RBP16.89■□□□□ 0.29
MBD4-203ENST00000429544 TRABD2AQ86V40 505 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 CENPIQ92674 756 aaPredicted RBP16.89■□□□□ 0.29
MBD4-203ENST00000429544 WNT8BQ93098 351 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 HSFY1Q96LI6 401 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.89■□□□□ 0.29
MBD4-203ENST00000429544 GTF2IRD1Q9UHL9 959 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 ST3GAL5Q9UNP4 418 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 AP4E1Q9UPM8 1137 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 XPO1O14980 1071 aaKnown RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 ZBED1O96006 694 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 RBL1P28749 1068 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 L1CAMP32004 1257 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 MLH1P40692 756 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 PIGZQ86VD9 579 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 FUKQ8N0W3 1084 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 PDIK1LQ8N165 341 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 CCDC185Q8N715 623 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 FAF2Q96CS3 445 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 NSRP1Q9H0G5 558 aaKnown RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 NRDE2Q9H7Z3 1164 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 NKIRAS1Q9NYS0 192 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 ZMYND8Q9ULU4 1186 aaPredicted RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 SMAPO00193 183 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 SPAG7O75391 227 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 PHBP35232 272 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 NR1H3Q13133 447 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 KCNJ11Q14654 390 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 CCDC121Q6ZUS5 278 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 VSIG1Q86XK7 387 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 LPPQ93052 612 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 FAM149B1Q96BN6 582 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 KCTD15Q96SI1 283 aaPredicted RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 HNRNPABQ99729 332 aaKnown RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 ELAC2Q9BQ52 826 aaKnown RBP16.88■□□□□ 0.29
MBD4-203ENST00000429544 FAM105AQ9NUU6 356 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 RABGEF1Q9UJ41 708 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 CHMP2BQ9UQN3 213 aa16.88■□□□□ 0.29
MBD4-203ENST00000429544 TCP11X1B4DZS4 312 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 KPNA6O60684 536 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 CYBAP13498 195 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 PTPN1P18031 435 aaKnown RBP16.87■□□□□ 0.29
MBD4-203ENST00000429544 KRT15P19012 456 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 GJA9P57773 515 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 DPYSL2Q16555 572 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 MDH1BQ5I0G3 518 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 EFHC2Q5JST6 749 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 ARCQ7LC44 396 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 PALM2Q8IXS6 379 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 CKAP2Q8WWK9 683 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 GAD1Q99259 594 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 MED10Q9BTT4 135 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 DUSP16Q9BY84 665 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 ARHGAP39Q9C0H5 1083 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 TRABDQ9H4I3 376 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 KIF9Q9HAQ2 790 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 RAB6BQ9NRW1 208 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 PAK5Q9P286 719 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 PSMC3IPQ9P2W1 217 aaPredicted RBP16.87■□□□□ 0.29
MBD4-203ENST00000429544 SLC24A2Q9UI40 661 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 ZNF638Q14966 1978 aaKnown RBP16.87■□□□□ 0.29
MBD4-203ENST00000429544 CFAP69A5D8W1 941 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 BEST1O76090 585 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 STX2P32856 288 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 SULT1E1P49888 294 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 AFF1P51825 1210 aaKnown RBP16.87■□□□□ 0.29
MBD4-203ENST00000429544 EFHC1Q5JVL4 640 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 FAXCQ5TGI0 409 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 ARHGEF18Q6ZSZ5 1173 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 C3orf62Q6ZUJ4 267 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 PIGWQ7Z7B1 504 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 DEFB106AQ8N104 65 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 FBF1Q8TES7 1133 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
MBD4-203ENST00000429544 SAMD15Q9P1V8 674 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 DNAH12Q6ZR08 3092 aa16.87■□□□□ 0.29
MBD4-203ENST00000429544 BCLAF3A2AJT9 711 aaKnown RBP16.86■□□□□ 0.29
MBD4-203ENST00000429544 ZNF487B1APH4 448 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 PIAS1O75925 651 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 NPR3P17342 541 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 SLC8A3P57103 927 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 GEMIN4P57678 1058 aaKnown RBP16.86■□□□□ 0.29
MBD4-203ENST00000429544 GBE1Q04446 702 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 RSPH3Q86UC2 560 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 PPM1EQ8WY54 764 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 TRIB2Q92519 343 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 RTP4Q96DX8 246 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 SENP8Q96LD8 212 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 MTMR10Q9NXD2 777 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 GABRQQ9UN88 632 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 CENPFP49454 3210 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 FAM47DPA6NHR8 397 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 CHRNA1P02708 482 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms