RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SAC3D1A6NKF1 404 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 TK2O00142 265 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 TKTP29401 623 aaKnown RBP13.18□□□□□ -0.3
LDB3-205ENST00000429277 KLK7P49862 253 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 C16orf72Q14CZ0 275 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 EPC2Q52LR7 807 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 IL1RL2Q9HB29 575 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 SYBUQ9NX95 663 aa13.18□□□□□ -0.3
LDB3-205ENST00000429277 KRT6AP02538 564 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 KRT6BP04259 564 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 KRT6CP48668 564 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 TGFB2P61812 414 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 CDC16Q13042 620 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 MPP3Q13368 585 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 NAB1Q13506 487 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 NCF4Q15080 339 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 FBXO47Q5MNV8 452 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 TTI2Q6NXR4 508 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 CASKIN2Q8WXE0 1202 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 C19orf60Q96EN9 201 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 FAM118BQ9BPY3 351 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 ASB7Q9H672 318 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 RGS18Q9NS28 235 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 RPS6KB2Q9UBS0 482 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 VPS28Q9UK41 221 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 ADAM30Q9UKF2 790 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 FRMPD1Q5SYB0 1578 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 CES2O00748 559 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 FKBP6O75344 327 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 GJB7Q6PEY0 223 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 LAYNQ6UX15 382 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 NOA1Q8NC60 698 aaKnown RBP13.17□□□□□ -0.3
LDB3-205ENST00000429277 TRHDEQ9UKU6 1024 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 PPP2R1BP30154 601 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 ITPK1Q13572 414 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 PDIA6Q15084 440 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 ATP6AP1LQ52LC2 224 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 SLC24A3Q9HC58 644 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 VPS51Q9UID3 782 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 F8VZ95 297 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 ZBTB39O15060 712 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 ZW10O43264 779 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 CCR1P32246 355 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 AVPR1AP37288 418 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 ZNF268Q14587 947 aaPredicted RBP13.17□□□□□ -0.3
LDB3-205ENST00000429277 ACAP1Q15027 740 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 R3HDM1Q15032 1099 aaKnown RBP13.17□□□□□ -0.3
LDB3-205ENST00000429277 ZCCHC8Q6NZY4 707 aaKnown RBP13.17□□□□□ -0.3
LDB3-205ENST00000429277 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 L2HGDHQ9H9P8 463 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 HEY2Q9UBP5 337 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
LDB3-205ENST00000429277 DGKIO75912 1065 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 PTPN3P26045 913 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 NFYCQ13952 458 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 MIB1Q86YT6 1006 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 PAFAH2Q99487 392 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 CISHQ9NSE2 258 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 KLK14Q9P0G3 267 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 VTI1BQ9UEU0 232 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 TAGLN3Q9UI15 199 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 STRNO43815 780 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 PLA2G6O60733 806 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 SERPINF2P08697 491 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 NR2C2P49116 596 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 CLCN3P51790 818 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 UBE3AQ05086 875 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 CCDC153Q494R4 210 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 CYP4Z2PQ8N1L4 340 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 STARD8Q92502 1023 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 IARS2Q9NSE4 1012 aaKnown RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 BARX2Q9UMQ3 279 aaPredicted RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 AP3M1Q9Y2T2 418 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 USP32Q8NFA0 1604 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 IFRD1O00458 451 aaPredicted RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 NFIBO00712 420 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 CPA3P15088 417 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 TRIM71Q2Q1W2 868 aaKnown RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 USP39Q53GS9 565 aaKnown RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 TAF2Q6P1X5 1199 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 STRA8Q7Z7C7 330 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 CARNMT1Q8N4J0 409 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
LDB3-205ENST00000429277 ELOVL6Q9H5J4 265 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 GPAMQ9HCL2 828 aa13.16□□□□□ -0.3
LDB3-205ENST00000429277 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms