RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 ETV4P43268 484 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 TMEM62Q0P6H9 643 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 HSPH1Q92598 858 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 RBM41Q96IZ5 413 aaKnown RBP17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 LPIN3Q9BQK8 851 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 EBF3Q9H4W6 596 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 PDP2Q9P2J9 529 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 PPARGC1AQ9UBK2 798 aaKnown RBP17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 SHOC2Q9UQ13 582 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 CNTN6Q9UQ52 1028 aa17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 FARP1Q9Y4F1 1045 aaPredicted RBP17.54■□□□□ 0.4
PCDH8P1-201ENST00000428983 A0A087WZ62 844 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 TCRBV5S1A1TA0A578 114 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 TM9SF1O15321 606 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 ZNF286BP0CG31 522 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 ZRSR2Q15696 482 aaKnown RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 PDCD2Q16342 344 aaPredicted RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 CDO1Q16878 200 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 ZBTB8OSQ8IWT0 167 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 C1orf127Q8N9H9 656 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 ATP11CQ8NB49 1132 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 TMEM35BQ8NCS4 154 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 FDXACB1Q9BRP7 624 aaPredicted RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 DHRS4Q9BTZ2 278 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 CDT1Q9H211 546 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 SLC7A8Q9UHI5 535 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 hCG_1818297A0A087WSY0 165 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 MEI4A8MW99 385 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 LACTBL1A8MY62 500 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 PSMC1P62191 440 aaKnown RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 MMRN1Q13201 1228 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 KRT72Q14CN4 511 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 CELF3Q5SZQ8 465 aaKnown RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 IER5Q5VY09 327 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 NPNTQ6UXI9 565 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 RAPH1Q70E73 1250 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 SULF1Q8IWU6 871 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 SCUBE1Q8IWY4 988 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 C12orf29Q8N999 325 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 NDNQ99608 321 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 ECSITQ9BQ95 431 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 TUBB6Q9BUF5 446 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 SPATA16Q9BXB7 569 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 PHACTR1Q9C0D0 580 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 SSU72Q9NP77 194 aaKnown RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 G3BP2Q9UN86 482 aaKnown RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 BRCA1P38398 1863 aaKnown RBP17.53■□□□□ 0.4
PCDH8P1-201ENST00000428983 ERBB2P04626 1255 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 CDC16Q13042 620 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 USP4Q13107 963 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 PTK7Q13308 1070 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 CFAP157Q5JU67 520 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 JADE1Q6IE81 842 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 ISLR2Q6UXK2 745 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 ZPBP2Q6X784 338 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 TRIM72Q6ZMU5 477 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 CCDC110Q8TBZ0 833 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 AZIN2Q96A70 460 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 CYB561D2O14569 222 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 CST8O60676 142 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 KRT3P12035 628 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 DSG1Q02413 1049 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 KBTBD12Q3ZCT8 623 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 NOL9Q5SY16 702 aaKnown RBP17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 ARID3BQ8IVW6 561 aaPredicted RBP17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 ULK2Q8IYT8 1036 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 GPC2Q8N158 579 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 ACTL9Q8TC94 416 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 MMADHCQ9H3L0 296 aaPredicted RBP17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 PCDH9Q9HC56 1237 aa17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 DDX43Q9NXZ2 648 aaKnown RBP17.52■□□□□ 0.4
PCDH8P1-201ENST00000428983 AVILO75366 819 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 LRCH4O75427 683 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 SORBS2O94875 1100 aaKnown RBP17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 DHRS4L1P0CG22 281 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 PHBP35232 272 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 RPL22P35268 128 aaKnown RBP17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 CDKN2BP42772 138 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 ALDH18A1P54886 795 aaKnown RBP17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 OTUD4Q01804 1114 aaKnown RBP17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 C1orf146Q5VVC0 180 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 MPZL3Q6UWV2 235 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 DRG1Q9Y295 367 aaKnown RBP17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 A6NJR5 290 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 HCRTO43612 131 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 RGS7P49802 495 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 RAP1GDS1P52306 607 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 NAT8LQ8N9F0 302 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 PYDC1Q8WXC3 89 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 DCPSQ96C86 337 aaKnown RBP17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 CALN1Q9BXU9 219 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 ELOVL4Q9GZR5 314 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 NDE1Q9NXR1 346 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 ANGPTL2Q9UKU9 493 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 CAPN14A8MX76 684 aa17.51■□□□□ 0.39
PCDH8P1-201ENST00000428983 A8MXQ7 604 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms