RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FCARP24071 287 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 MEA1Q16626 185 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 HFE2Q6ZVN8 426 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 TMEM110Q86TL2 294 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 BPIFB1Q8TDL5 484 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 E2F7Q96AV8 911 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 C18orf8Q96DM3 657 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 RSPRY1Q96DX4 576 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 ZFYVE19Q96K21 471 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 PCDHB18PQ96TA0 734 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 TTYH3Q9C0H2 523 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.26■□□□□ 0.03
SGCE-204ENST00000428696 ZNHIT6Q9NWK9 470 aaKnown RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 AIPL1Q9NZN9 384 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 CFAP97Q9P2B7 532 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 DNMT3LQ9UJW3 386 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 STRIP2Q9ULQ0 834 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 NCANO14594 1321 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 SOBPA7XYQ1 873 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 TNFRSF10AO00220 468 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 LEFTY2O00292 366 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 STK25O00506 426 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 PAPSS1O43252 624 aaPredicted RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 OAS1P00973 400 aaKnown RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 LTFP02788 710 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 ZDHHC11BP0C7U3 371 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 NCAM1P13591 858 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 NSFP46459 744 aaKnown RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 ADKP55263 362 aaKnown RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 TRIM14Q14142 442 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 TAF5Q15542 800 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 PTPN20Q4JDL3 420 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 TRIM72Q6ZMU5 477 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 MMS22LQ6ZRQ5 1243 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 MFSD6LQ8IWD5 586 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 IRGQQ8WZA9 623 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 KHSRPQ92945 711 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■■■■□ 25.3
SGCE-204ENST00000428696 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 CDK5RAP1Q96SZ6 601 aaKnown RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 TRPV4Q9HBA0 871 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 ABCC13Q9NSE7 274 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 CLIC5Q9NZA1 410 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 SH3BP1Q9Y3L3 701 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 SLC12A8A0AV02 714 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 DLL1O00548 723 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 SART1O43290 800 aaKnown RBP15.25■□□□□ 0.03
SGCE-204ENST00000428696 DCXO43602 365 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 PFKLP17858 780 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 TUBP50607 506 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 YWHAZP63104 245 aaKnown RBP15.25■□□□□ 0.03
SGCE-204ENST00000428696 NOMO3P69849 1222 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 CLEC16AQ2KHT3 1053 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 EFHC1Q5JVL4 640 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 FAM183BPQ6ZVS7 135 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 ZNF571Q7Z3V5 609 aaPredicted RBP15.25■□□□□ 0.03
SGCE-204ENST00000428696 OR8K1Q8NGG5 319 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 MARCH2Q9P0N8 246 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 SFMBT1Q9UHJ3 866 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 ARHGAP26Q9UNA1 814 aa15.25■□□□□ 0.03
SGCE-204ENST00000428696 SYNJ2BP-COX16A0A087WUM0 186 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 AKR1B15C9JRZ8 316 aaPredicted RBP15.24■□□□□ 0.03
SGCE-204ENST00000428696 SERPING1P05155 500 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 ALADP13716 330 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 SLC7A9P82251 487 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 DCAF6Q58WW2 860 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 FAM102AQ5T9C2 384 aaPredicted RBP15.24■□□□□ 0.03
SGCE-204ENST00000428696 TOGARAM2Q6ZUX3 1019 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 BHLHA9Q7RTU4 235 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 VPS36Q86VN1 386 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 ADAM32Q8TC27 787 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 CSGALNACT1Q8TDX6 532 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 DEPDC1BQ8WUY9 529 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 KIF9Q9HAQ2 790 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 DUS2Q9NX74 493 aaKnown RBP15.24■□□□□ 0.03
SGCE-204ENST00000428696 ADAM22Q9P0K1 906 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 COX16Q9P0S2 106 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 CA14Q9ULX7 337 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 NAALADL1Q9UQQ1 740 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 WNT6Q9Y6F9 365 aa15.24■□□□□ 0.03
SGCE-204ENST00000428696 ADCY5O95622 1261 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 CYP1A1P04798 512 aaPredicted RBP15.23■□□□□ 0.03
SGCE-204ENST00000428696 SRFP11831 508 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 WEE1P30291 646 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 IFNAR2P48551 515 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 KPNA1P52294 538 aaPredicted RBP15.23■□□□□ 0.03
SGCE-204ENST00000428696 ZXDAP98168 799 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 ZXDBP98169 803 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 SLC6A3Q01959 620 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 MTF1Q14872 753 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 TRIM68Q6AZZ1 485 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 ACAD10Q6JQN1 1059 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 DNAAF5Q86Y56 855 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 UBALD2Q8IYN6 164 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 SPC24Q8NBT2 197 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 SYN2Q92777 582 aaPredicted RBP15.23■□□□□ 0.03
SGCE-204ENST00000428696 TRIM62Q9BVG3 475 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms