RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CFAP57Q96MR6 1250 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 KCNK16Q96T55 309 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 LBHD1Q9BQE6 289 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 STIM2Q9P246 746 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 LRRD1A4D1F6 860 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 C3orf70A6NLC5 250 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 YJEFN3A6XGL0 299 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 E7ENQ6 273 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 C5orf67F2Z3F1 127 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CAPN9O14815 690 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 RB1P06400 928 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 LINC00271P0C7V0 271 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ACRP10323 421 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CTSAP10619 480 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 SLC2A3P11169 496 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ATF2P15336 505 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 H2AFXP16104 143 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ATP2A2P16615 1042 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ZFXP17010 805 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 KDELR1P24390 212 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CYP2F1P24903 491 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 IL1R2P27930 398 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 SSR1P43307 286 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 DNA2P51530 1060 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ARSEP51690 589 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 DRG2P55039 364 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ROR1Q01973 937 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 PLD1Q13393 1074 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 EIF4EBP2Q13542 120 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CUL1Q13616 776 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 SIX1Q15475 284 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 TAF5Q15542 800 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ELF2Q15723 593 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ARL13BQ3SXY8 428 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 MAP9Q49MG5 647 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 DCAF6Q58WW2 860 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 BRMS1LQ5PSV4 323 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 PDE12Q6L8Q7 609 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 DENND5BQ6ZUT9 1274 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 GPRIN1Q7Z2K8 1008 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CCDC50Q8IVM0 306 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 C7orf61Q8IZ16 206 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 DEFB106AQ8N104 65 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 PRELID2Q8N945 189 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CCHCR1Q8TD31 782 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CLEC4CQ8WTT0 213 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 SEC14L1Q92503 715 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 TRMT2BQ96GJ1 504 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 VN1R3Q9BXE9 311 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 RAB17Q9H0T7 212 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 SMOC2Q9H3U7 446 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ANKZF1Q9H8Y5 726 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 NGRNQ9NPE2 291 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 MRPL17Q9NRX2 175 aaKnown RBP9.46□□□□□ -0.9
NR1I3-209ENST00000428574 HCSTQ9UBK5 93 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 NR2E3Q9Y5X4 410 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 CDY1Q9Y6F8 540 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 VWA8A3KMH1 1905 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
NR1I3-209ENST00000428574 WDR27A2RRH5 827 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 NT5C1B-RDH14C9J2C7 533 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 APOC4-APOC2K7ER74 178 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 LILRB3O75022 631 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 FGF18O76093 207 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 APOC2P02655 101 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 FYNP06241 537 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 USP17L7P0C7H9 530 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 CSH1P0DML2 217 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 CSH2P0DML3 217 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 RARAP10276 462 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 RALAP11233 206 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 TGM2P21980 687 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 YWHAQP27348 245 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 HCAR3P49019 387 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 CXCR3P49682 368 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 SULT1E1P49888 294 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 TUBP50607 506 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 KPNA1P52294 538 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-209ENST00000428574 YWHAGP61981 247 aaKnown RBP eCLIP9.45□□□□□ -0.9
NR1I3-209ENST00000428574 DEUP1Q05D60 604 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 C2orf54Q08AI8 447 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-209ENST00000428574 PPP2R5DQ14738 602 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 PTPROQ16827 1216 aa9.45□□□□□ -0.9
NR1I3-209ENST00000428574 C15orf59Q2T9L4 293 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms