RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 UBTFL6P0CB48 400 aaPredicted RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 CTSEP14091 401 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ATP6V1C1P21283 382 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ACVR2BQ13705 512 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 STILQ15468 1287 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ISLR2Q6UXK2 745 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 FGD2Q7Z6J4 655 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 GATAD2AQ86YP4 633 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 COL26A1Q96A83 441 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 EME1Q96AY2 570 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 OMDQ99983 421 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 EMILIN2Q9BXX0 1053 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 CLPBQ9H078 707 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 WDR35Q9P2L0 1181 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 TISP43B9A030 160 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 WNT10BO00744 389 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ELNP15502 786 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ABCG1P45844 678 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 PPATQ06203 517 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 PAK5Q9P286 719 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 TRIM49D1C9J1S8 452 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 PTK6Q13882 451 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 CENPPQ6IPU0 288 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ACAD10Q6JQN1 1059 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 SYDE1Q6ZW31 735 aaPredicted RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 JAMLQ86YT9 394 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 RSAD1Q9HA92 442 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 NOP53Q9NZM5 478 aaKnown RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 SH3BP4Q9P0V3 963 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 PON1P27169 355 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 PNPLA4P41247 253 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 NDST1P52848 882 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 PLA2G4EQ3MJ16 856 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 CBWD3Q5JTY5 395 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 CBWD5Q5RIA9 395 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 GTF3C2Q8WUA4 911 aaPredicted RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 TSC22D3Q99576 134 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 THG1LQ9NWX6 298 aaKnown RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 RNF103O00237 685 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 HNF4AP41235 474 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 NDUFV1P49821 464 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 STAT4Q14765 748 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ZNF484Q5JVG2 852 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 SPOCD1Q6ZMY3 1216 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 CCDC60Q8IWA6 550 aaPredicted RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 EPS8L3Q8TE67 593 aaKnown RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 STAMBPL1Q96FJ0 436 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 MYCBPQ99417 103 aaPredicted RBP13.57□□□□□ -0.24
SPG11-202ENST00000427534 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 VANGL2Q9ULK5 521 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 AP4E1Q9UPM8 1137 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 ZNF711Q9Y462 761 aa13.57□□□□□ -0.24
SPG11-202ENST00000427534 NRXN1Q9ULB1 1477 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 PTPAQ15257 358 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 FBXO36Q8NEA4 188 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 MKNK1Q9BUB5 465 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 FAM86B1E9PN63 330 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 WASP42768 502 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 MAGEA9P43362 315 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 ABCE1P61221 599 aaKnown RBP13.56□□□□□ -0.24
SPG11-202ENST00000427534 VAC14Q08AM6 782 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 RARS2Q5T160 578 aaKnown RBP13.56□□□□□ -0.24
SPG11-202ENST00000427534 ARHGAP17Q68EM7 881 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 SYTL1Q8IYJ3 562 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 MYO1HQ8N1T3 1032 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPG11-202ENST00000427534 WWP1Q9H0M0 922 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 OGTO15294 1046 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 TPD52L3Q96J77 140 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 USP18Q9UMW8 372 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 IFRD1O00458 451 aaPredicted RBP13.56□□□□□ -0.24
SPG11-202ENST00000427534 CCDC22O60826 627 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 TARSP26639 723 aaKnown RBP13.56□□□□□ -0.24
SPG11-202ENST00000427534 KRT20P35900 424 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 NAPEPLDQ6IQ20 393 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 ANO5Q75V66 913 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 NT5DC4Q86YG4 428 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 C2orf73Q8N5S3 287 aaPredicted RBP13.56□□□□□ -0.24
SPG11-202ENST00000427534 ROGDIQ9GZN7 287 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 MSRAQ9UJ68 235 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 CSNK2BP67870 215 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 CNTN1Q12860 1018 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 AP1ARQ63HQ0 302 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 LUZP2Q86TE4 346 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 TAS1R2Q8TE23 839 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 TRPC4APQ8TEL6 797 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 CNDP1Q96KN2 507 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 GPRC5DQ9NZD1 345 aa13.56□□□□□ -0.24
SPG11-202ENST00000427534 CEP170BQ9Y4F5 1589 aaPredicted RBP13.56□□□□□ -0.24
SPG11-202ENST00000427534 MGAT4DA6NG13 374 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 LACTBL1A8MY62 500 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 MAN1A2O60476 641 aa13.55□□□□□ -0.24
SPG11-202ENST00000427534 SKIV2L2P42285 1042 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms