RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 GPR62Q9BZJ7 368 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 ZCWPW1Q9H0M4 648 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 LRRC19Q9H756 370 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 ARFGAP3Q9NP61 516 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 KLHL11Q9NVR0 708 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 PCYOX1Q9UHG3 505 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 PI4K2BG5E9Z4 385 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 FGFR3P22607 806 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 BDNFP23560 247 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 CDKN2BP42772 138 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 NDUFV1P49821 464 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 DHX34Q14147 1143 aaKnown RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 SMC1AQ14683 1233 aaKnown RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 LLGL1Q15334 1064 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 TAZQ16635 292 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 RAB6CQ53S08 254 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 VARS2Q5ST30 1063 aaKnown RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 GPRIN1Q7Z2K8 1008 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 SIX6OS1Q8N1H7 587 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 CLP1Q92989 425 aaKnown RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 MAGOHBQ96A72 148 aaKnown RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 UHRF1Q96T88 793 aaPredicted RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 RAB6CQ9H0N0 254 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 ZWILCHQ9H900 591 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 PNPLA8Q9NP80 782 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 DMAP1Q9NPF5 467 aaPredicted RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 CNGB3Q9NQW8 809 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 BDP1A6H8Y1 2624 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 KIAA1671Q9BY89 1806 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 ATG2AQ2TAZ0 1938 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 C5orf67F2Z3F1 127 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 TNFRSF10AO00220 468 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 DAB1O75553 588 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 MYBL2P10244 700 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 CTNNB1P35222 781 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 BCAR1P56945 870 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 ATP11AP98196 1134 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 BTG3Q14201 252 aaPredicted RBP18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 BEND6Q5SZJ8 279 aaPredicted RBP18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 FAM171A1Q5VUB5 890 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 TTC27Q6P3X3 843 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 C4orf50Q6ZRC1 276 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 IFT20Q8IY31 132 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 FAM172AQ8WUF8 416 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 ACSF2Q96CM8 615 aaPredicted RBP18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 HINFPQ9BQA5 517 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 HEMGNQ9BXL5 484 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 ULBP1Q9BZM6 244 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 PCSK1NQ9UHG2 260 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 EFR3BQ9Y2G0 817 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 RWDD3Q9Y3V2 267 aa18.75■□□□□ 0.59
AC055811.2-201ENST00000427497 SF3B1O75533 1304 aaKnown RBP eCLIP18.74■□□□□ 0.598e-7■■■■■ 75.9
AC055811.2-201ENST00000427497 hCG_1818297A0A087WSY0 165 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 LRRD1A4D1F6 860 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 ZSCAN5CA6NGD5 496 aaPredicted RBP18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 TTI1O43156 1089 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 DESP17661 470 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 BMPR1AP36894 532 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 COILP38432 576 aaPredicted RBP18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 MATKP42679 507 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 PTGIRP43119 386 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 FNTAP49354 379 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 HDAC4P56524 1084 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 DAOAP59103 153 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 YWHAZP63104 245 aaKnown RBP18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 GUCY2DQ02846 1103 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 ELAVL2Q12926 359 aaKnown RBP18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 CDO1Q16878 200 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 SMTNL2Q2TAL5 461 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 TFDP3Q5H9I0 405 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 KCNT1Q5JUK3 1230 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 ZFYVE27Q5T4F4 411 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 FUT10Q6P4F1 479 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 DCP1BQ8IZD4 617 aaKnown RBP18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 SCML4Q8N228 414 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 SEC14L1Q92503 715 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 NDRG1Q92597 394 aaKnown RBP18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 RUNDC3BQ96NL0 473 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 SLC2A13Q96QE2 648 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 ADAM33Q9BZ11 813 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 EPB41L5Q9HCM4 733 aa18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 NGRNQ9NPE2 291 aaKnown RBP18.74■□□□□ 0.59
AC055811.2-201ENST00000427497 MYO7AQ13402 2215 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 FAM187AA6NFU0 413 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 ENDOD1O94919 500 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 SEC31AO94979 1220 aaKnown RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 EFEMP2O95967 443 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 RB1P06400 928 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 TFE3P19532 575 aaPredicted RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 KDELR1P24390 212 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 DR1Q01658 176 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 MTERF4Q7Z6M4 381 aaKnown RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 SPATA2LQ8IUW3 424 aaPredicted RBP18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 TEKT4Q8WW24 435 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 NT5C3BQ969T7 300 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 PLEKHA4Q9H4M7 779 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 CWH43Q9H720 699 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 HOMER3Q9NSC5 361 aa18.73■□□□□ 0.59
AC055811.2-201ENST00000427497 PRPSAP2O60256 369 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms