RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 RNF219Q5W0B1 726 aaPredicted RBP6.43□□□□□ -1.38
C9orf3-205ENST00000427193 GRASPQ7Z6J2 395 aaPredicted RBP6.43□□□□□ -1.38
C9orf3-205ENST00000427193 CD99L2Q8TCZ2 262 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
C9orf3-205ENST00000427193 EYA3Q99504 573 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 GNL3LQ9NVN8 582 aaKnown RBP6.43□□□□□ -1.38
C9orf3-205ENST00000427193 NR2E3Q9Y5X4 410 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 SCN9AQ15858 1988 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 GAKO14976 1311 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 DOCK2Q92608 1830 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 A0A0D9SFI3 127 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 YY2O15391 372 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 MPPED1O15442 326 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 ECE2O60344 883 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 PRDX5P30044 214 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 ADD2P35612 726 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 KCNJ4P48050 445 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 ARHGEF6Q15052 776 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 TTF1Q15361 905 aaPredicted RBP6.42□□□□□ -1.38
C9orf3-205ENST00000427193 SLC9C1Q4G0N8 1177 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 GORABQ5T7V8 394 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 VWA1Q6PCB0 445 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.42□□□□□ -1.38
C9orf3-205ENST00000427193 ADGRA1Q86SQ6 560 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 AMOTL1Q8IY63 956 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 NAF1Q96HR8 494 aaKnown RBP6.42□□□□□ -1.38
C9orf3-205ENST00000427193 ZBED3Q96IU2 234 aaPredicted RBP6.42□□□□□ -1.38
C9orf3-205ENST00000427193 TIMP4Q99727 224 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 RIOK1Q9BRS2 568 aaKnown RBP6.42□□□□□ -1.38
C9orf3-205ENST00000427193 HTATIP2Q9BUP3 242 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 WDR26Q9H7D7 661 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 INTS13Q9NVM9 706 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 ARPP21Q9UBL0 812 aaPredicted RBP6.42□□□□□ -1.38
C9orf3-205ENST00000427193 NEU2Q9Y3R4 380 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 RAD50Q92878 1312 aa6.42□□□□□ -1.38
C9orf3-205ENST00000427193 LAMB1P07942 1786 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 PRAMEF33A0A0G2JMD5 474 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 RNF113AO15541 343 aaKnown RBP6.41□□□□□ -1.38
C9orf3-205ENST00000427193 PROM1O43490 865 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 PRAMEF10O60809 474 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 MAP4K4O95819 1239 aaPredicted RBP6.41□□□□□ -1.38
C9orf3-205ENST00000427193 ZFYP08048 801 aaPredicted RBP6.41□□□□□ -1.38
C9orf3-205ENST00000427193 ZNF280AP59817 542 aaPredicted RBP6.41□□□□□ -1.38
C9orf3-205ENST00000427193 AKNAD1Q5T1N1 836 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 SDE2Q6IQ49 451 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 CLNKQ7Z7G1 428 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 RHOT1Q8IXI2 618 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 TBC1D22AQ8WUA7 517 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 NRG4Q8WWG1 115 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 FAM227BQ96M60 508 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 SLC2A13Q96QE2 648 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 LSG1Q9H089 658 aaKnown RBP6.41□□□□□ -1.38
C9orf3-205ENST00000427193 PUS7LQ9H0K6 701 aaKnown RBP6.41□□□□□ -1.38
C9orf3-205ENST00000427193 DBNDD1Q9H9R9 158 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 KMT5AQ9NQR1 393 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 HELLSQ9NRZ9 838 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 ASB6Q9NWX5 421 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 ENTPD2Q9Y5L3 495 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 CACNA1AO00555 2505 aa6.41□□□□□ -1.38
C9orf3-205ENST00000427193 GPR75-ASB3A0A0A6YYF3 556 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 MANSC4A6NHS7 340 aaPredicted RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 TRIM75PA6NK02 468 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 HIP1O00291 1037 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 MTHFD1P11586 935 aaKnown RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 KCNA2P16389 499 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 WT1P19544 449 aaPredicted RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 CNGA1P29973 690 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 MMP14P50281 582 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 RHBDL3P58872 404 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 RPS7P62081 194 aaKnown RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 SP3Q02447 781 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 MECOMQ03112 1051 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 KLF1Q13351 362 aaPredicted RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 LRIT3Q3SXY7 679 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 SLC9C2Q5TAH2 1124 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 PAPD7Q5XG87 772 aaKnown RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 KAZNQ674X7 775 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 TTLL5Q6EMB2 1281 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 ZNF589Q86UQ0 364 aaPredicted RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 DCBLD1Q8N8Z6 715 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 COG1Q8WTW3 980 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 ANKS1AQ92625 1134 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 MAP4K1Q92918 833 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 FAM122AQ96E09 287 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 STRBPQ96SI9 672 aaKnown RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 SAP30BPQ9UHR5 308 aaKnown RBP6.4□□□□□ -1.38
C9orf3-205ENST00000427193 INTUQ9ULD6 942 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 PSME4Q14997 1843 aa6.4□□□□□ -1.38
C9orf3-205ENST00000427193 ZNF532Q9HCE3 1301 aa6.4□□□□□ -1.39
C9orf3-205ENST00000427193 RPAP1Q9BWH6 1393 aaPredicted RBP6.4□□□□□ -1.39
C9orf3-205ENST00000427193 CLSTN1O94985 981 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 CAPN2P17655 700 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 SLC6A4P31645 630 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 NF2P35240 595 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 CDC42EP1Q00587 391 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 ALX1Q15699 326 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 MCMDC2Q4G0Z9 681 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 PABPC1LQ4VXU2 614 aaKnown RBP6.39□□□□□ -1.39
C9orf3-205ENST00000427193 ZSCAN25Q6NSZ9 544 aa6.39□□□□□ -1.39
C9orf3-205ENST00000427193 APOBEC3HQ6NTF7 200 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms