RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 FAM92AA1XBS5 289 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
SCRN1-205ENST00000425819 KCNK3O14649 394 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 LRCH4O75427 683 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 C8AP07357 584 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 CSH1P0DML2 217 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 CSH2P0DML3 217 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 DESP17661 470 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 CTNNA2P26232 953 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 CTNNA1P35221 906 aaKnown RBP16.49■□□□□ 0.23
SCRN1-205ENST00000425819 ACAP1Q15027 740 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 CCDC149Q6ZUS6 474 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 ADGRD2Q7Z7M1 963 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 RBM23Q86U06 439 aaKnown RBP16.49■□□□□ 0.23
SCRN1-205ENST00000425819 MON1AQ86VX9 555 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 UBL4BQ8N7F7 174 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 ALG3Q92685 438 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 OSBPL9Q96SU4 736 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 TTLL2Q9BWV7 592 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 OSER1Q9NX31 292 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 STAP1Q9ULZ2 295 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 SAR1BQ9Y6B6 198 aa16.49■□□□□ 0.23
SCRN1-205ENST00000425819 SYNJ2BP-COX16A0A087WUM0 186 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 CCDC66A2RUB6 948 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 HMGA1P17096 107 aaKnown RBP16.48■□□□□ 0.23
SCRN1-205ENST00000425819 MIPP30301 263 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 ATXN1P54253 815 aaKnown RBP16.48■□□□□ 0.23
SCRN1-205ENST00000425819 PLD1Q13393 1074 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 SLC25A52Q3SY17 297 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 RHOT1Q8IXI2 618 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 ARHGAP18Q8N392 663 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 ADAM32Q8TC27 787 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 SLITRK1Q96PX8 696 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 NPY6RQ99463 290 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 TRIM62Q9BVG3 475 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 LMAN2LQ9H0V9 348 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 ABCC13Q9NSE7 274 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 COX16Q9P0S2 106 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 PCSK1NQ9UHG2 260 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 PCDHA3Q9Y5H8 950 aa16.48■□□□□ 0.23
SCRN1-205ENST00000425819 M0QYT0 321 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 ZNF185O15231 689 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 LRG1P02750 347 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 EPCAMP16422 314 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 HDAC4P56524 1084 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 MLLT1Q03111 559 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 NME3Q13232 169 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 OTUD1Q5VV17 481 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 TXNRD3NBQ6F5E7 133 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 SCYL2Q6P3W7 929 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 DNAJB7Q7Z6W7 309 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 COG1Q8WTW3 980 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 CENPIQ92674 756 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 ZWILCHQ9H900 591 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 MAN1C1Q9NR34 630 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 TLR8Q9NR97 1041 aaKnown RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 EHD2Q9NZN4 543 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 NUDT5Q9UKK9 219 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 PSTPIP1O43586 416 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 TCP1P17987 556 aaKnown RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 IL1R2P27930 398 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 PCK1P35558 622 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 PEX5P50542 639 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 SLC25A11Q02978 314 aaKnown RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 ZNF211Q13398 564 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 HADHQ16836 314 aaKnown RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 ATP13A4Q4VNC1 1196 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 PPM1LQ5SGD2 360 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 ZFYVE27Q5T4F4 411 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 DCAF12L1Q5VU92 463 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 RSRC2Q7L4I2 434 aaKnown RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 BEND5Q7L4P6 421 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 STRADAQ7RTN6 431 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 DQX1Q8TE96 717 aaKnown RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 RNF139Q8WU17 664 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 SLC22A17Q8WUG5 538 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 NT5C3BQ969T7 300 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 PSMG2Q969U7 264 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 CAPZA3Q96KX2 299 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 PEBP4Q96S96 227 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 TLE6Q9H808 572 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 FAM204AQ9H8W3 233 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 USP18Q9UMW8 372 aa16.47■□□□□ 0.23
SCRN1-205ENST00000425819 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCRN1-205ENST00000425819 CCL16O15467 120 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 PRPSAP2O60256 369 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 TRUB2O95900 331 aaKnown RBP16.46■□□□□ 0.23
SCRN1-205ENST00000425819 RARGP13631 454 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 PRLRP16471 622 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 RDXP35241 583 aaKnown RBP16.46■□□□□ 0.23
SCRN1-205ENST00000425819 RWDD2BP57060 319 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 DEUP1Q05D60 604 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 SMTNL2Q2TAL5 461 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 TAC4Q86UU9 113 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 ITIH5Q86UX2 942 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms