RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 OLFML1Q6UWY5 402 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 RSRC2Q7L4I2 434 aaKnown RBP25.24■■□□□ 1.63
APOE-202ENST00000425718 DDX42Q86XP3 938 aaKnown RBP eCLIP25.24■■□□□ 1.63
APOE-202ENST00000425718 NPAS3Q8IXF0 933 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 C3orf20Q8ND61 904 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 OLIG1Q8TAK6 271 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 MCRS1Q96EZ8 462 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 PDLIM2Q96JY6 352 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 KIF9Q9HAQ2 790 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 TRPC7Q9HCX4 862 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 MRPL47Q9HD33 250 aaKnown RBP25.24■■□□□ 1.63
APOE-202ENST00000425718 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.24■■□□□ 1.63
APOE-202ENST00000425718 SCINQ9Y6U3 715 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 YJEFN3A6XGL0 299 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 TMCO5BA8MYB1 307 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 E7ENQ6 273 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 GABBR2O75899 941 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 OAS1P00973 400 aaKnown RBP25.23■■□□□ 1.63
APOE-202ENST00000425718 HDCP19113 662 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 ATP5C1P36542 298 aaKnown RBP25.23■■□□□ 1.63
APOE-202ENST00000425718 CCDC173Q0VFZ6 552 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 FAM102AQ5T9C2 384 aaPredicted RBP25.23■■□□□ 1.63
APOE-202ENST00000425718 MTSS1LQ765P7 747 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 SCD5Q86SK9 330 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 MAB21L3Q8N8X9 362 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 NXPE3Q969Y0 559 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 SELENOOQ9BVL4 669 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 PARVAQ9NVD7 372 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 EPS15L1Q9UBC2 864 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 DNMT3LQ9UJW3 386 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 INTUQ9ULD6 942 aa25.23■■□□□ 1.63
APOE-202ENST00000425718 PTMAP06454 111 aaKnown RBP25.22■■□□□ 1.63
APOE-202ENST00000425718 CKMP06732 381 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 KPNA1P52294 538 aaPredicted RBP25.22■■□□□ 1.63
APOE-202ENST00000425718 TFF2Q03403 129 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 GFPT1Q06210 699 aaPredicted RBP25.22■■□□□ 1.63
APOE-202ENST00000425718 PTP4A2Q12974 167 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 TXNDC8Q6A555 127 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 DNAJC24Q6P3W2 148 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 BHLHA9Q7RTU4 235 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 CMTM8Q8IZV2 173 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 ING5Q8WYH8 240 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 OBP2AQ9NY56 170 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 STAP1Q9ULZ2 295 aa25.22■■□□□ 1.63
APOE-202ENST00000425718 EYSQ5T1H1 3165 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 EIF3CLB5ME19 914 aaKnown RBP25.21■■□□□ 1.63
APOE-202ENST00000425718 DAB1O75553 588 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 OLFM2O95897 454 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 H2AFZP0C0S5 128 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 GJA1P17302 382 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 SLC7A9P82251 487 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 C10orf120Q5SQS8 335 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 MSANTD2Q6P1R3 559 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 H2AFVQ71UI9 128 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 ZDHHC14Q8IZN3 488 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 KIAA1958Q8N8K9 716 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 CLEC4CQ8WTT0 213 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 CTNNBL1Q8WYA6 563 aaPredicted RBP25.21■■□□□ 1.63
APOE-202ENST00000425718 SMARCD2Q92925 531 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 ZNF653Q96CK0 615 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 EIF3CQ99613 913 aaKnown RBP25.21■■□□□ 1.63
APOE-202ENST00000425718 NMUR1Q9HB89 426 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 TRPV4Q9HBA0 871 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 PRDM6Q9NQX0 595 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 TAS2R14Q9NYV8 317 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 CDH22Q9UJ99 828 aa25.21■■□□□ 1.63
APOE-202ENST00000425718 EPN1Q9Y6I3 576 aaPredicted RBP25.21■■□□□ 1.63
APOE-202ENST00000425718 PRUNE2Q8WUY3 3088 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 DPYSL4O14531 572 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 LCA5LO95447 670 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 KRT3P12035 628 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 LAMP2P13473 410 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 NCAM1P13591 858 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 NOS2P35228 1153 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 GPC5P78333 572 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 SLC2A13Q96QE2 648 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 SLC46A2Q9BY10 475 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 TJP2Q9UDY2 1190 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 LCMT1Q9UIC8 334 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 NENFQ9UMX5 172 aa25.2■■□□□ 1.62
APOE-202ENST00000425718 SIGLEC16A6NMB1 481 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 GOLGA8SH3BPF8 625 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 ARHGAP6O43182 974 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 NDUFA10O95299 355 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 MBL2P11226 248 aaPredicted RBP25.19■■□□□ 1.62
APOE-202ENST00000425718 TCF3P15923 654 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 GBP1P32455 592 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 KRT83P78385 493 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 COG7P83436 770 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 NNTQ13423 1086 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 DCUN1D2Q6PH85 259 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 LRRC8AQ8IWT6 810 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 ADHFE1Q8IWW8 467 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 ZSCAN18Q8TBC5 510 aaPredicted RBP25.19■■□□□ 1.62
APOE-202ENST00000425718 FEZF2Q8TBJ5 459 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 ASB16Q96NS5 453 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 SERPINB11Q96P15 392 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 MYADMQ96S97 322 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 ZFP14Q9HCL3 533 aa25.19■■□□□ 1.62
APOE-202ENST00000425718 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms