RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 DPEP1P16444 411 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SARNPP82979 210 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 OCRLQ01968 901 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 AP1B1Q10567 949 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 KCNJ11Q14654 390 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SURF1Q15526 300 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 LY6KQ17RY6 165 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 HSF5Q4G112 596 aaPredicted RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 CASC4Q6P4E1 433 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 KBTBD2Q8IY47 623 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 FNIP1Q8TF40 1166 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 JDP2Q8WYK2 163 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 FAM136AQ96C01 138 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PIWIL1Q96J94 861 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 MMP19Q99542 508 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SHCBP1LQ9BZQ2 653 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PDGFDQ9GZP0 370 aaPredicted RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 LHX5Q9H2C1 402 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 RPF1Q9H9Y2 349 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PIH1D1Q9NWS0 290 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 KCNK4Q9NYG8 393 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 CNTN3Q9P232 1028 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PAK5Q9P286 719 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 RGS17Q9UGC6 210 aaPredicted RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 TTLL3Q9Y4R7 772 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 GJA3Q9Y6H8 435 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 MYH9P35579 1960 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PRR5-ARHGAP8B1AHC4 643 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 MAFO75444 373 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 KRT38O76015 456 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 USP1O94782 785 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 GPD1P21695 349 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 MRPS5P82675 430 aaKnown RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ARHGAP8P85298 464 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 LBRQ14739 615 aaKnown RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 TAZQ16635 292 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ATF7IP2Q5U623 682 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 BSPRYQ5W0U4 402 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 FAM160B1Q5W0V3 765 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 CES4AQ5XG92 561 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 CCNJLQ8IV13 435 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 PLD5Q8N7P1 536 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC4A11Q8NBS3 891 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 MTBPQ96DY7 904 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ZBED3Q96IU2 234 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 RNF157Q96PX1 679 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 EBF4Q9BQW3 602 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 C20orf27Q9GZN8 174 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 KLC2Q9H0B6 622 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 WWP1Q9H0M0 922 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 USP29Q9HBJ7 922 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 AS3MTQ9HBK9 375 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 KRT82Q9NSB4 513 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 HACL1Q9UJ83 578 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 NR2E3Q9Y5X4 410 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 SPAG6O75602 509 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 RFPL1O75677 317 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 NFICP08651 508 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 CSH1P0DML2 217 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 CSH2P0DML3 217 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 TSHRP16473 764 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 PTPRAP18433 802 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 GRIA1P42261 906 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 PAPOLAP51003 745 aaKnown RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 STX3Q13277 289 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 TARBP2Q15633 366 aaKnown RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 IZUMO2Q6UXV1 221 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 MAP7D3Q8IWC1 876 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 TRIM42Q8IWZ5 723 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 POU5F2Q8N7G0 328 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 PHC3Q8NDX5 983 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 HIPK4Q8NE63 616 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 TMEM176AQ96HP8 235 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ZNF184Q99676 751 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 CNPY3Q9BT09 278 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ARHGEF4Q9NR80 690 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 TAGLN3Q9UI15 199 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ANGPTL2Q9UKU9 493 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 E2F8A0AVK6 867 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 CHADO15335 359 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 LYPLA1O75608 230 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 FARP2O94887 1054 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 NPTXRO95502 500 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ANPEPP15144 967 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ZNF143P52747 638 aaPredicted RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 EPHB1P54762 984 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 IER5Q5VY09 327 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 MPZL3Q6UWV2 235 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 UNC5AQ6ZN44 842 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 CAND1Q86VP6 1230 aaKnown RBP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ULK2Q8IYT8 1036 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 UNC5BQ8IZJ1 945 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 MPP5Q8N3R9 675 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 C12orf29Q8N999 325 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 C1orf127Q8N9H9 656 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 DEPDC1BQ8WUY9 529 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 SEPT1Q8WYJ6 367 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 SH3GL3Q99963 347 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms