RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SND1Q7KZF4 910 aaKnown RBP eCLIP10.8□□□□□ -0.68
MDC1-205ENST00000425072 STRADAQ7RTN6 431 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 RCOR2Q8IZ40 523 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 EMC1Q8N766 993 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 KREMEN2Q8NCW0 462 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 SCAMP5Q8TAC9 235 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 CENPIQ92674 756 aaPredicted RBP10.8□□□□□ -0.68
MDC1-205ENST00000425072 FBXO32Q969P5 355 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 NT5C3BQ969T7 300 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 RNF25Q96BH1 459 aaPredicted RBP10.8□□□□□ -0.68
MDC1-205ENST00000425072 BTBD6Q96KE9 485 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 MYRFLQ96LU7 910 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 SLC2A13Q96QE2 648 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 TTLL2Q9BWV7 592 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 TLR10Q9BXR5 811 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 OLA1Q9NTK5 396 aaKnown RBP10.8□□□□□ -0.68
MDC1-205ENST00000425072 CLIC5Q9NZA1 410 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 CDC23Q9UJX2 597 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 SNX12Q9UMY4 172 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 USTQ9Y2C2 406 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 FARP1Q9Y4F1 1045 aaPredicted RBP10.8□□□□□ -0.68
MDC1-205ENST00000425072 TTC28Q96AY4 2481 aa10.8□□□□□ -0.68
MDC1-205ENST00000425072 PLXNA4Q9HCM2 1894 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 A0A1W2PPC1 479 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 PSTPIP1O43586 416 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 PRPSAP2O60256 369 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 ZRANB2O95218 330 aaKnown RBP eCLIP10.79□□□□□ -0.68
MDC1-205ENST00000425072 GJB6O95452 261 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 VNN2O95498 520 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 ATP1A1P05023 1023 aaKnown RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 PYGBP11216 843 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 DNAJB1P25685 340 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 CTNNA1P35221 906 aaKnown RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 PBX2P40425 430 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 KPNA1P52294 538 aaPredicted RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 TAF10Q12962 218 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 MTA1Q13330 715 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 ZFYVE27Q5T4F4 411 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 SNX30Q5VWJ9 437 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 GPRIN1Q7Z2K8 1008 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 POLNQ7Z5Q5 900 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 DNAJB7Q7Z6W7 309 aaPredicted RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 MAP7D3Q8IWC1 876 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 STKLD1Q8NE28 680 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 GIPC2Q8TF65 315 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 CLEC4CQ8WTT0 213 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 ARNTL2Q8WYA1 636 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 TIFAQ96CG3 184 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 PGAP3Q96FM1 320 aaPredicted RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 TRMT2BQ96GJ1 504 aaKnown RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 OSBPL9Q96SU4 736 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 TBCBQ99426 244 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 NAP1L3Q99457 506 aaPredicted RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 NPY6RQ99463 290 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 CDCA3Q99618 268 aaPredicted RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 TRIM7Q9C029 511 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 CARD9Q9H257 536 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 CRISPLD1Q9H336 500 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 TLE6Q9H808 572 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 RRAGDQ9NQL2 400 aaPredicted RBP10.79□□□□□ -0.68
MDC1-205ENST00000425072 TRPM5Q9NZQ8 1165 aa10.79□□□□□ -0.68
MDC1-205ENST00000425072 ZNF638Q14966 1978 aaKnown RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 MYO9BQ13459 2157 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 M0QYT0 321 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 KCNK3O14649 394 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 RIOK3O14730 519 aaKnown RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 FGF19O95750 216 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 TRUB2O95900 331 aaKnown RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 SLC2A3P11169 496 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 PTPN2P17706 415 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 FLT3P36888 993 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 PEX5P50542 639 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 AIF1P55008 147 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 COPS2P61201 443 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 ATP11AP98196 1134 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 OGDHQ02218 1023 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 DEUP1Q05D60 604 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 TWF1Q12792 350 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 IFRD2Q12894 506 aaPredicted RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 CAMK1Q14012 370 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 WHAMMP3Q1A5X7 153 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 ARL13BQ3SXY8 428 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 PPM1LQ5SGD2 360 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 ERMARDQ5T6L9 678 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 ACBD5Q5T8D3 534 aaPredicted RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 CCDC181Q5TID7 509 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 SDHAF4Q5VUM1 108 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 SCYL2Q6P3W7 929 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 RSRC2Q7L4I2 434 aaKnown RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 PSTKQ8IV42 348 aaKnown RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 MNS1Q8NEH6 495 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 FAM172AQ8WUF8 416 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 MAIP1Q8WWC4 291 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 NDRG1Q92597 394 aaKnown RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 CD101Q93033 1021 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 PSMG2Q969U7 264 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 CFAP57Q96MR6 1250 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 LMCD1Q9NZU5 365 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms