RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 RPL13P26373 211 aaKnown RBP18.73■□□□□ 0.59
GPC1-203ENST00000425056 PSMC2P35998 433 aaKnown RBP18.73■□□□□ 0.59
GPC1-203ENST00000425056 MCCD1P59942 119 aaPredicted RBP18.73■□□□□ 0.59
GPC1-203ENST00000425056 EOGTQ5NDL2 527 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 BTBD8Q5XKL5 378 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 TCEAL6Q6IPX3 200 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 TCEAL3Q969E4 200 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 TMEM8AQ9HCN3 771 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.73■□□□□ 0.59
GPC1-203ENST00000425056 INVSQ9Y283 1065 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 PCDHA5Q9Y5H7 936 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 ATP6V1DQ9Y5K8 247 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 EPG5Q9HCE0 2579 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 CYP26A1O43174 497 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 ADAM23O75077 832 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 CILPO75339 1184 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 CAVIN2O95810 425 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 PREPLQ4J6C6 727 aaPredicted RBP18.72■□□□□ 0.59
GPC1-203ENST00000425056 EMC10Q5UCC4 262 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 HTR3DQ70Z44 454 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 TMEM25Q86YD3 366 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 TERB1Q8NA31 727 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 KCNV2Q8TDN2 545 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 WHAMMQ8TF30 809 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 CYFIP2Q96F07 1278 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 KLF16Q9BXK1 252 aaPredicted RBP18.72■□□□□ 0.59
GPC1-203ENST00000425056 POLMQ9NP87 494 aaPredicted RBP18.72■□□□□ 0.59
GPC1-203ENST00000425056 OSER1Q9NX31 292 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 DEC1Q9P2X7 70 aa18.72■□□□□ 0.59
GPC1-203ENST00000425056 TBX18O95935 607 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 GTF2H1P32780 548 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 ATP5C1P36542 298 aaKnown RBP18.71■□□□□ 0.59
GPC1-203ENST00000425056 P2RY2P41231 377 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 ADAM9Q13443 819 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 ANO4Q32M45 955 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 EDRF1Q3B7T1 1238 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 RNF43Q68DV7 783 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 KLHDC10Q6PID8 442 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 NAT16Q8N8M0 369 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 EDEM2Q9BV94 578 aa18.71■□□□□ 0.59
GPC1-203ENST00000425056 LNP1A1A4G5 178 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 TBC1D3BA6NDS4 549 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 CACNG3O60359 315 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 ZNF202O95125 648 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 CD58P19256 250 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 ACO1P21399 889 aaKnown RBP18.7■□□□□ 0.58
GPC1-203ENST00000425056 KIF11P52732 1056 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 GOLGA8FQ08AF8 430 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 GOLGA8DPQ0D2H9 430 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 KRT39Q6A163 491 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 CYP2U1Q7Z449 544 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 TRMT11Q7Z4G4 463 aaKnown RBP18.7■□□□□ 0.58
GPC1-203ENST00000425056 TTC30AQ86WT1 665 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 ZNF513Q8N8E2 541 aaPredicted RBP18.7■□□□□ 0.58
GPC1-203ENST00000425056 CCDC150Q8NCX0 1101 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 JAKMIP2Q96AA8 810 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 FAXDC2Q96IV6 333 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 SPACA7Q96KW9 195 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 MMRN2Q9H8L6 949 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 NMUR1Q9HB89 426 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 ZDHHC4Q9NPG8 344 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.7■□□□□ 0.58
GPC1-203ENST00000425056 MARK1Q9P0L2 795 aa18.7■□□□□ 0.58
GPC1-203ENST00000425056 LSM7Q9UK45 103 aaKnown RBP18.7■□□□□ 0.58
GPC1-203ENST00000425056 CACNA1BQ00975 2339 aa18.69■□□□□ 0.58
GPC1-203ENST00000425056 A0A1W2PQH9 124 aa18.69■□□□□ 0.58
GPC1-203ENST00000425056 MXI1P50539 228 aa18.69■□□□□ 0.58
GPC1-203ENST00000425056 C10orf76Q5T2E6 689 aa18.69■□□□□ 0.58
GPC1-203ENST00000425056 NUDT18Q6ZVK8 323 aa18.69■□□□□ 0.58
GPC1-203ENST00000425056 CCDC186Q7Z3E2 898 aa18.69■□□□□ 0.58
GPC1-203ENST00000425056 LSM14BQ9BX40 385 aaKnown RBP18.69■□□□□ 0.58
GPC1-203ENST00000425056 DNAI2Q9GZS0 605 aa18.69■□□□□ 0.58
GPC1-203ENST00000425056 BCCIPQ9P287 314 aaKnown RBP eCLIP18.69■□□□□ 0.58
GPC1-203ENST00000425056 TCRBV21S2A2A0A5A6 115 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 NEDD8-MDP1E9PL57 170 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 RARGP13631 454 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 KCNA4P22459 653 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 PSEN1P49768 467 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 PPP1R26Q5T8A7 1209 aaPredicted RBP18.68■□□□□ 0.58
GPC1-203ENST00000425056 GRAMD4Q6IC98 578 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 Q6ZNB5 142 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 SMYD4Q8IYR2 804 aaPredicted RBP18.68■□□□□ 0.58
GPC1-203ENST00000425056 ZNF276Q8N554 614 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 TTC39CQ8N584 583 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 HMGB4Q8WW32 186 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 RLN3Q8WXF3 142 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 SEMA4DQ92854 862 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 BBS2Q9BXC9 721 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 DUSP16Q9BY84 665 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 DNAJC17Q9NVM6 304 aaKnown RBP18.68■□□□□ 0.58
GPC1-203ENST00000425056 DNMT3LQ9UJW3 386 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 HCN2Q9UL51 889 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 STARD13Q9Y3M8 1113 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 USP3Q9Y6I4 520 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 CHD8Q9HCK8 2581 aa18.68■□□□□ 0.58
GPC1-203ENST00000425056 KMT2BQ9UMN6 2715 aaPredicted RBP18.67■□□□□ 0.58
GPC1-203ENST00000425056 MDM4O15151 490 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 TRIM24O15164 1050 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 TYRP14679 529 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 DHPSP49366 369 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms