RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SUMF1Q8NBK3 374 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 RBBP8NLQ8NC74 664 aaPredicted RBP18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 CRACR2AQ9BSW2 395 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 SEMA4AQ9H3S1 761 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 CLIC5Q9NZA1 410 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 TBC1D14Q9P2M4 693 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 KIAA1257Q9ULG3 409 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 CNTN6Q9UQ52 1028 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 SH3BP1Q9Y3L3 701 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 GVINP1Q7Z2Y8 2422 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 PTPRZ1P23471 2315 aaPredicted RBP18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 ZNF292O60281 2723 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 CHRM1P11229 460 aaPredicted RBP18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 SLC9A1P19634 815 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 BRD2P25440 801 aaKnown RBP18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 PLA2G4AP47712 749 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 PSEN1P49768 467 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 LY6G5CQ5SRR4 150 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 GJB7Q6PEY0 223 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 TRIM65Q6PJ69 517 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 HTR3DQ70Z44 454 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 SFTPA1Q8IWL2 248 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 IPO9Q96P70 1041 aaKnown RBP18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 FAM126AQ9BYI3 521 aaPredicted RBP18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 ULBP1Q9BZM6 244 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 NACA2Q9H009 215 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 HESX1Q9UBX0 185 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 EP300Q09472 2414 aaPredicted RBP18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 EML5Q05BV3 1969 aa18.75■□□□□ 0.59
SBDSP1-202ENST00000423945 CHURC1-FNTBB4DL54 471 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 K7EQS6 105 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 LMNAP02545 664 aaKnown RBP18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 ERCC5P28715 1186 aaPredicted RBP18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 CNGA2Q16280 664 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 C10orf120Q5SQS8 335 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 RBM43Q6ZSC3 357 aaKnown RBP18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 TMEM25Q86YD3 366 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 CREBRFQ8IUR6 639 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 PHTF2Q8N3S3 785 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 SLC35F5Q8WV83 523 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 KCTD13Q8WZ19 329 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 OTUB2Q96DC9 234 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 THAP9Q9H5L6 903 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 DNMT3LQ9UJW3 386 aa18.74■□□□□ 0.59
SBDSP1-202ENST00000423945 ZBED1O96006 694 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 SETSIPP0DME0 302 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 ADH5P11766 374 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 FNTBP49356 437 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 YWHAGP61981 247 aaKnown RBP eCLIP18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 ADIGQ0VDE8 80 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 FBXO43Q4G163 708 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 DPY19L2P1Q6NXN4 242 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 PMF1Q6P1K2 205 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 Q6ZNB5 142 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 ETFBKMTQ8IXQ9 262 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 ATRIPQ8WXE1 791 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 P2RY11Q96G91 374 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 UBE2TQ9NPD8 197 aaPredicted RBP18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 AJAP1Q9UKB5 411 aaPredicted RBP18.73■□□□□ 0.59
SBDSP1-202ENST00000423945 BECN2A8MW95 431 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 STC2O76061 302 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 ADH1CP00326 375 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 KLKB1P03952 638 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 RALAP11233 206 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 MTIF2P46199 727 aaKnown RBP18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 RGS7P49802 495 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 SLC8A3P57103 927 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 HSP90AA4PQ58FG1 418 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 MIIPQ5JXC2 388 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 MIB1Q86YT6 1006 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 RPLP0P6Q8NHW5 317 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 SECISBP2LQ93073 1101 aaKnown RBP18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 EPC1Q9H2F5 836 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 LRRC4Q9HBW1 653 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 SIX2Q9NPC8 291 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 ACP6Q9NPH0 428 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 SPHK2Q9NRA0 654 aa18.72■□□□□ 0.59
SBDSP1-202ENST00000423945 MYO18AQ92614 2054 aaKnown RBP18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 GTPBP10A4D1E9 387 aaKnown RBP18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 YJEFN3A6XGL0 299 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 E7ENQ6 273 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 M0QYV0 167 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 HOXC11O43248 304 aaPredicted RBP18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 PON1P27169 355 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 HOXA6P31267 233 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 EIF2DP41214 584 aaKnown RBP18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 NRLP54845 237 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 DAOAP59103 153 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 GAD2Q05329 585 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 EFEMP1Q12805 493 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 PPP2R5DQ14738 602 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 MAN2A1Q16706 1144 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 GBP6Q6ZN66 633 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 SCML4Q8N228 414 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 USP33Q8TEY7 942 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 EXOC4Q96A65 974 aa18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 SAMSN1Q9NSI8 373 aaKnown RBP18.71■□□□□ 0.59
SBDSP1-202ENST00000423945 RASAL2Q9UJF2 1139 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms