RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ABCD1P33897 745 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
PTPRN-204ENST00000423636 HHATQ5VTY9 493 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 SDHAF4Q5VUM1 108 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 BBS12Q6ZW61 710 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 GPRIN1Q7Z2K8 1008 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 KIRREL3Q8IZU9 778 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 FITM2Q8N6M3 262 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 MAML1Q92585 1016 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 FAM111AQ96PZ2 611 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 SMC6Q96SB8 1091 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 CNPY3Q9BT09 278 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 DDX56Q9NY93 547 aaKnown RBP12.41□□□□□ -0.42
PTPRN-204ENST00000423636 SZT2Q5T011 3432 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 FAM72CH0Y354 149 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 PYGBP11216 843 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 DARSP14868 501 aaKnown RBP12.41□□□□□ -0.42
PTPRN-204ENST00000423636 MAN1A1P33908 653 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 CLCNKBP51801 687 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 FAM72AQ5TYM5 149 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 FAM72DQ6L9T8 149 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 KCNT2Q6UVM3 1135 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 LCLAT1Q6UWP7 414 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 ZCCHC23Q6ZST2 131 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 LRRC6Q86X45 466 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 FAM72BQ86X60 149 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 LINC01465Q8N7H1 131 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 TCP10LQ8TDR4 215 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 SLCO2A1Q92959 643 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 RNF157Q96PX1 679 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 ZNF518BQ9C0D4 1074 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 LHX5Q9H2C1 402 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 RABGEF1Q9UJ41 708 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 L3MBTL1Q9Y468 752 aa12.41□□□□□ -0.42
PTPRN-204ENST00000423636 MYBPHLA2RUH7 354 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SNX3O60493 162 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 PAEPP09466 180 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 USP17L7P0C7H9 530 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SAT1P21673 171 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 MSH2P43246 934 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SCNN1GP51170 649 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 ARL4CP56559 192 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TRABD2AQ86V40 505 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 PPIL6Q8IXY8 311 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 PDIK1LQ8N165 341 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 BEST2Q8NFU1 509 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 GPR152Q8TDT2 470 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 CCT6BQ92526 530 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 PRR11Q96HE9 360 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SERAC1Q96JX3 654 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SNX27Q96L92 541 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SIK2Q9H0K1 926 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 PCDH9Q9HC56 1237 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 A0A0G2JND7 137 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 NRP1O14786 923 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 ITGAVP06756 1048 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TAC1P20366 129 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TARSP26639 723 aaKnown RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 CDH5P33151 784 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 BRCC3P46736 316 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SULT1E1P49888 294 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SLC6A3Q01959 620 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 GRB14Q14449 540 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 APBB1IPQ7Z5R6 666 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 NAT8LQ8N9F0 302 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 APPL2Q8NEU8 664 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 CMASQ8NFW8 434 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 CELF6Q96J87 481 aaKnown RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TMEM209Q96SK2 561 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TACO1Q9BSH4 297 aaKnown RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 ANLNQ9NQW6 1124 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 ITGA11Q9UKX5 1188 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 AP4E1Q9UPM8 1137 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 ZNF638Q14966 1978 aaKnown RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TCRBV9S1A1TA0A576 114 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 FAM47DPA6NHR8 397 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 A6NJR5 290 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 APOC4-APOC2K7ER74 178 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 M0QYT0 321 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 CBX6O95503 412 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 APOC2P02655 101 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 OR4Q2P0C623 313 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 GHRP10912 638 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 CDC25CP30307 473 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 PSEN2P49810 448 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 MCCD1P59942 119 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 CDHR3Q6ZTQ4 885 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 SLC35F5Q8WV83 523 aa12.4□□□□□ -0.42
PTPRN-204ENST00000423636 KCTD15Q96SI1 283 aaPredicted RBP12.4□□□□□ -0.42
PTPRN-204ENST00000423636 APOL1O14791 398 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms