RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ANO4Q32M45 955 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 EOGTQ5NDL2 527 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 ETFBKMTQ8IXQ9 262 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 POLMQ9NP87 494 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-206ENST00000423161 ZDHHC4Q9NPG8 344 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 ATP6V1DQ9Y5K8 247 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 HHLA1C9JL84 531 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 CYP26A1O43174 497 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 TULP3O75386 442 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 CAVIN2O95810 425 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 TBX18O95935 607 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 CD58P19256 250 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 ACO1P21399 889 aaKnown RBP19.51■□□□□ 0.71
SREBF1-206ENST00000423161 BCKDHBP21953 392 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 PSMC2P35998 433 aaKnown RBP19.51■□□□□ 0.71
SREBF1-206ENST00000423161 ENPEPQ07075 957 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 PREPLQ4J6C6 727 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-206ENST00000423161 TMEM25Q86YD3 366 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 CCDC150Q8NCX0 1101 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 CYFIP2Q96F07 1278 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 EDEM2Q9BV94 578 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 CYLDQ9NQC7 956 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 DEC1Q9P2X7 70 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 SCML2Q9UQR0 700 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 CACNA1BQ00975 2339 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 GON4LQ3T8J9 2241 aa19.51■□□□□ 0.71
SREBF1-206ENST00000423161 TBC1D3BA6NDS4 549 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 CILPO75339 1184 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 ZNF202O95125 648 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 ATP5C1P36542 298 aaKnown RBP19.5■□□□□ 0.71
SREBF1-206ENST00000423161 GOLGA8FQ08AF8 430 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 GOLGA8DPQ0D2H9 430 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 ADAM9Q13443 819 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 ZCWPW2Q504Y3 356 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 RNF43Q68DV7 783 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 HTR3DQ70Z44 454 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 CYP2U1Q7Z449 544 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 OLIG1Q8TAK6 271 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 WHAMMQ8TF30 809 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 KLF16Q9BXK1 252 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-206ENST00000423161 TMEM8AQ9HCN3 771 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 PNPLA8Q9NP80 782 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 OSER1Q9NX31 292 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 BCCIPQ9P287 314 aaKnown RBP eCLIP19.5■□□□□ 0.71
SREBF1-206ENST00000423161 CIZ1Q9ULV3 898 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-206ENST00000423161 PCDHA5Q9Y5H7 936 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 EPG5Q9HCE0 2579 aa19.5■□□□□ 0.71
SREBF1-206ENST00000423161 TM4SF5O14894 197 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 ADAM23O75077 832 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 DHPSP49366 369 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-206ENST00000423161 C10orf76Q5T2E6 689 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 NUDT18Q6ZVK8 323 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 ZNF513Q8N8E2 541 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-206ENST00000423161 TERB1Q8NA31 727 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 HMGB4Q8WW32 186 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 RLN3Q8WXF3 142 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 SPACA7Q96KW9 195 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 DNAI2Q9GZS0 605 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 NMUR1Q9HB89 426 aa19.49■□□□□ 0.71
SREBF1-206ENST00000423161 LSM7Q9UK45 103 aaKnown RBP19.49■□□□□ 0.71
SREBF1-206ENST00000423161 CHD8Q9HCK8 2581 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 A0A1W2PQH9 124 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 TCRBV21S2A2A0A5A6 115 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 GREM1O60565 184 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 GTF2H1P32780 548 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 P2RY2P41231 377 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 EDRF1Q3B7T1 1238 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 ZNF394Q53GI3 561 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 PPP1R26Q5T8A7 1209 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-206ENST00000423161 KRT39Q6A163 491 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 GRAMD4Q6IC98 578 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 TRMT11Q7Z4G4 463 aaKnown RBP19.48■□□□□ 0.71
SREBF1-206ENST00000423161 GDPD2Q9HCC8 539 aa19.48■□□□□ 0.71
SREBF1-206ENST00000423161 DNAJC17Q9NVM6 304 aaKnown RBP19.48■□□□□ 0.71
SREBF1-206ENST00000423161 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.48■□□□□ 0.717e-6■□□□□ 9.4
SREBF1-206ENST00000423161 MAP1BP46821 2468 aaKnown RBP19.48■□□□□ 0.71
SREBF1-206ENST00000423161 NEDD8-MDP1E9PL57 170 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 MDM4O15151 490 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 TRIM24O15164 1050 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 RARGP13631 454 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 MXI1P50539 228 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 KIF11P52732 1056 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 C10orf120Q5SQS8 335 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 SMYD4Q8IYR2 804 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-206ENST00000423161 PGBD3Q8N328 593 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 KCNV2Q8TDN2 545 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 SEMA4DQ92854 862 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 EEF2KMTQ96G04 330 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 CCDC34Q96HJ3 373 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 BBS2Q9BXC9 721 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 DUSP16Q9BY84 665 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 NAGPAQ9UK23 515 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 NUDT5Q9UKK9 219 aa19.47■□□□□ 0.71
SREBF1-206ENST00000423161 LNP1A1A4G5 178 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 MAP3K13O43283 966 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 CACNG3O60359 315 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 EPB41P11171 864 aaKnown RBP19.46■□□□□ 0.71
SREBF1-206ENST00000423161 TYRP14679 529 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 KLHDC10Q6PID8 442 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms