RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 AOC1P19801 751 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 MTERF2Q49AM1 385 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 SPATA24Q86W54 205 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 PNPLA8Q9NP80 782 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 CYP26B1Q9NR63 512 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 RAB6BQ9NRW1 208 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 ZC3H7BQ9UGR2 993 aaKnown RBP22.07■■□□□ 1.12
USP48-205ENST00000421625 ZNF646O15015 1829 aaPredicted RBP22.07■■□□□ 1.12
USP48-205ENST00000421625 SPAG6O75602 509 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 BPGMP07738 259 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 HIRAP54198 1017 aaPredicted RBP22.07■■□□□ 1.12
USP48-205ENST00000421625 DENND5BQ6ZUT9 1274 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 NDUFAF2Q8N183 169 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 EFCAB3Q8N7B9 438 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 ZNF778Q96MU6 729 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 IMPG2Q9BZV3 1241 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 KLHL4Q9C0H6 718 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 POPDC2Q9HBU9 364 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 STK10O94804 968 aaKnown RBP22.07■■□□□ 1.12
USP48-205ENST00000421625 VCLP18206 1134 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 MYL6P60660 151 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 PRKCEQ02156 737 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 STX3Q13277 289 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 TUBB3Q13509 450 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 MROH9Q5TGP6 573 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 NMD3Q96D46 503 aaKnown RBP22.07■■□□□ 1.12
USP48-205ENST00000421625 PXMP2Q9NR77 195 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 CLIC5Q9NZA1 410 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 ATXN10Q9UBB4 475 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 FBXO40Q9UH90 709 aa22.07■■□□□ 1.12
USP48-205ENST00000421625 VAV1P15498 845 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 GRM2Q14416 872 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 NME8Q8N427 588 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 CYP4F11Q9HBI6 524 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 XAB2Q9HCS7 855 aaKnown RBP22.06■■□□□ 1.12
USP48-205ENST00000421625 LMCD1Q9NZU5 365 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 TXNDC9O14530 226 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 ITM2AO43736 263 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 TOM1L1O75674 476 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 ASS1P00966 412 aaKnown RBP22.06■■□□□ 1.12
USP48-205ENST00000421625 WASHC5Q12768 1159 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 CCDC60Q8IWA6 550 aaPredicted RBP22.06■■□□□ 1.12
USP48-205ENST00000421625 ATP6V0A1Q93050 837 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 ZNF180Q9UJW8 692 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 PHF24Q9UPV7 400 aa22.06■■□□□ 1.12
USP48-205ENST00000421625 HMX2A2RU54 273 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 LRRIQ4A6NIV6 560 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 YDJCA8MPS7 323 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 PGM3O95394 542 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 MIPP30301 263 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 MMEL1Q495T6 779 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 ARHGEF16Q5VV41 709 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 FBXL19Q6PCT2 694 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 ISLR2Q6UXK2 745 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 STKLD1Q8NE28 680 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 COL2A1P02458 1487 aaPredicted RBP22.05■■□□□ 1.12
USP48-205ENST00000421625 EIF4BP23588 611 aaKnown RBP22.05■■□□□ 1.12
USP48-205ENST00000421625 PSMC1P62191 440 aaKnown RBP22.05■■□□□ 1.12
USP48-205ENST00000421625 CDK18Q07002 472 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 PDK3Q15120 406 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 LRRN4Q8WUT4 740 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 ZNF518BQ9C0D4 1074 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 MTMR12Q9C0I1 747 aa22.05■■□□□ 1.12
USP48-205ENST00000421625 DOCK5Q9H7D0 1870 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 PDLIM1O00151 329 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 CCNT2O60583 730 aaKnown RBP22.04■■□□□ 1.12
USP48-205ENST00000421625 PROCP04070 461 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 PIM1P11309 404 aaPredicted RBP22.04■■□□□ 1.12
USP48-205ENST00000421625 CDH5P33151 784 aaPredicted RBP22.04■■□□□ 1.12
USP48-205ENST00000421625 TNFSF9P41273 254 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 GHRHRQ02643 423 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 PEX6Q13608 980 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 TRIP10Q15642 601 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 RABGAP1LQ5R372 815 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 TRMT10BQ6PF06 316 aaKnown RBP22.04■■□□□ 1.12
USP48-205ENST00000421625 DNAJC16Q9Y2G8 782 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 H7C0C1 242 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 CHADO15335 359 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 PRKCHP24723 683 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 ATP5OP48047 213 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 INHBCP55103 352 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 USP4Q13107 963 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 C1orf228Q6PIY5 440 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 CAND1Q86VP6 1230 aaKnown RBP22.04■■□□□ 1.12
USP48-205ENST00000421625 ZNF341Q9BYN7 854 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 TMOD2Q9NZR1 351 aa22.04■■□□□ 1.12
USP48-205ENST00000421625 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.03■■□□□ 1.12
USP48-205ENST00000421625 RAD17O75943 681 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 EMC2Q15006 297 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 NOMO1Q15155 1222 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 RAB6CQ53S08 254 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 C16orf46Q6P387 395 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 ADGRF2Q8IZF7 708 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 CMASQ8NFW8 434 aaPredicted RBP22.03■■□□□ 1.12
USP48-205ENST00000421625 ITFG2Q969R8 447 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 RAB6CQ9H0N0 254 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 THAP1Q9NVV9 213 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 H0YCG3 227 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 K7ERI5 159 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms