RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TULP3O75386 442 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 CAVIN2O95810 425 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 TRIM49P0CI25 452 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 TRIM49CP0CI26 452 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 HNRNPLP14866 589 aaKnown RBP eCLIP18.33■□□□□ 0.52
MSH6-203ENST00000420813 ADORA2BP29275 332 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 GTF2H1P32780 548 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 GCLMP48507 274 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 PGFP49763 221 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 GOLGA8FQ08AF8 430 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 GOLGA8DPQ0D2H9 430 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 ZCWPW2Q504Y3 356 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 KLHDC10Q6PID8 442 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 NUDT18Q6ZVK8 323 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 WHAMMQ8TF30 809 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 CNTNAP3BQ96NU0 1288 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 KLF16Q9BXK1 252 aaPredicted RBP18.33■□□□□ 0.52
MSH6-203ENST00000420813 CNTNAP3Q9BZ76 1288 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 SMOC1Q9H4F8 434 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 TMEM8AQ9HCN3 771 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 DEC1Q9P2X7 70 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 MAPK8IP1Q9UQF2 711 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 CILPO75339 1184 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 IRF1P10914 325 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 ATP5C1P36542 298 aaKnown RBP18.32■□□□□ 0.52
MSH6-203ENST00000420813 ADAM9Q13443 819 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 EDRF1Q3B7T1 1238 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 EMC10Q5UCC4 262 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 RNF43Q68DV7 783 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 GPRIN1Q7Z2K8 1008 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 TRMT11Q7Z4G4 463 aaKnown RBP18.32■□□□□ 0.52
MSH6-203ENST00000420813 TMEM25Q86YD3 366 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 TERB1Q8NA31 727 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 WBP2Q969T9 261 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 CCDC34Q96HJ3 373 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 LSM7Q9UK45 103 aaKnown RBP18.32■□□□□ 0.52
MSH6-203ENST00000420813 INVSQ9Y283 1065 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 CHD8Q9HCK8 2581 aa18.32■□□□□ 0.52
MSH6-203ENST00000420813 MAP1BP46821 2468 aaKnown RBP18.31■□□□□ 0.52
MSH6-203ENST00000420813 TBC1D3BA6NDS4 549 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 GREM1O60565 184 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 ADAM23O75077 832 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 ZNF202O95125 648 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 ACO1P21399 889 aaKnown RBP18.31■□□□□ 0.52
MSH6-203ENST00000420813 BCKDHBP21953 392 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 P2RY2P41231 377 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 PSEN1P49768 467 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 ANO4Q32M45 955 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 KRT39Q6A163 491 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 TCEAL6Q6IPX3 200 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 ZNF276Q8N554 614 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 TTC39CQ8N584 583 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 NAT16Q8N8M0 369 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 TCEAL3Q969E4 200 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 SPACA7Q96KW9 195 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 EDEM2Q9BV94 578 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 LSM14BQ9BX40 385 aaKnown RBP18.31■□□□□ 0.52
MSH6-203ENST00000420813 GOLPH3LQ9H4A5 285 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 FAM124BQ9H5Z6 455 aaPredicted RBP18.31■□□□□ 0.52
MSH6-203ENST00000420813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.31■□□□□ 0.52
MSH6-203ENST00000420813 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 MARK1Q9P0L2 795 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 STARD13Q9Y3M8 1113 aa18.31■□□□□ 0.52
MSH6-203ENST00000420813 CYP26A1O43174 497 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 CACNG3O60359 315 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 TBX18O95935 607 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 CD58P19256 250 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 KIF11P52732 1056 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 BYSLQ13895 437 aaKnown RBP18.3■□□□□ 0.52
MSH6-203ENST00000420813 CCDC186Q7Z3E2 898 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 CYP2U1Q7Z449 544 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 TTC30AQ86WT1 665 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 ZNF513Q8N8E2 541 aaPredicted RBP18.3■□□□□ 0.52
MSH6-203ENST00000420813 XPO6Q96QU8 1125 aaKnown RBP18.3■□□□□ 0.52
MSH6-203ENST00000420813 DUSP16Q9BY84 665 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 NMUR1Q9HB89 426 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.3■□□□□ 0.52
MSH6-203ENST00000420813 WDR35Q9P2L0 1181 aa18.3■□□□□ 0.52
MSH6-203ENST00000420813 LNP1A1A4G5 178 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 KHNYNO15037 678 aaKnown RBP18.29■□□□□ 0.52
MSH6-203ENST00000420813 STX10O60499 249 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 SPDYCQ5MJ68 293 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 C10orf76Q5T2E6 689 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 GRAMD4Q6IC98 578 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 TADA2BQ86TJ2 420 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 JAKMIP2Q96AA8 810 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 BCCIPQ9P287 314 aaKnown RBP eCLIP18.29■□□□□ 0.52
MSH6-203ENST00000420813 DNMT3LQ9UJW3 386 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 USP3Q9Y6I4 520 aa18.29■□□□□ 0.52
MSH6-203ENST00000420813 KMT2BQ9UMN6 2715 aaPredicted RBP18.29■□□□□ 0.52
MSH6-203ENST00000420813 ASCC3Q8N3C0 2202 aaKnown RBP18.29■□□□□ 0.52
MSH6-203ENST00000420813 A0A1W2PQH9 124 aa18.28■□□□□ 0.52
MSH6-203ENST00000420813 TCRBV21S2A2A0A5A6 115 aa18.28■□□□□ 0.52
MSH6-203ENST00000420813 RARGP13631 454 aa18.28■□□□□ 0.52
MSH6-203ENST00000420813 TYRP14679 529 aa18.28■□□□□ 0.52
MSH6-203ENST00000420813 KCNA4P22459 653 aa18.28■□□□□ 0.52
MSH6-203ENST00000420813 PLA2G4AP47712 749 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms