RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 DNAJC3Q13217 504 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 SNX17Q15036 470 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 XKR4Q5GH76 650 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 MORN1Q5T089 497 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 RGS9BPQ6ZS82 235 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 PALM2Q8IXS6 379 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 ANKRD52Q8NB46 1076 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 TBCBQ99426 244 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 PARK7Q99497 189 aaKnown RBP16.83■□□□□ 0.28
CTSB-203ENST00000420692 C12orf65Q9H3J6 166 aaKnown RBP16.83■□□□□ 0.28
CTSB-203ENST00000420692 HESX1Q9UBX0 185 aa16.83■□□□□ 0.28
CTSB-203ENST00000420692 UBQLN1Q9UMX0 589 aaKnown RBP16.83■□□□□ 0.28
CTSB-203ENST00000420692 SMG5Q9UPR3 1016 aaKnown RBP16.83■□□□□ 0.28
CTSB-203ENST00000420692 HAS3O00219 553 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 APOL1O14791 398 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 TGM2P21980 687 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 CA4P22748 312 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 PHBP35232 272 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 GNL1P36915 607 aaPredicted RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 BCAR1P56945 870 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 MFSD10Q14728 455 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 FAXCQ5TGI0 409 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 ECHDC2Q86YB7 292 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 MAP7D3Q8IWC1 876 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 SUGP1Q8IWZ8 645 aaKnown RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 RAB6BQ9NRW1 208 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 CPA4Q9UI42 421 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 PIN4Q9Y237 131 aaKnown RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 ZNF236Q9UL36 1845 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 TCRBV9S1A1TA0A576 114 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 BCLAF3A2AJT9 711 aaKnown RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 KPNA7A9QM74 516 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 KBTBD13C9JR72 458 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 CHADO15335 359 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 LCP1P13796 627 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 TKTP29401 623 aaKnown RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 PTPN9P43378 593 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 CDC42EP1Q00587 391 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 GBE1Q04446 702 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 SPARCL1Q14515 664 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 PDK4Q16654 411 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 PPP6R3Q5H9R7 873 aaPredicted RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 CYB5D1Q6P9G0 228 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 SLC26A9Q7LBE3 791 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 CAND1Q86VP6 1230 aaKnown RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 NDRG1Q92597 394 aaKnown RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 PITPNM3Q9BZ71 974 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 NRDE2Q9H7Z3 1164 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 GDAP2Q9NXN4 497 aa16.82■□□□□ 0.28
CTSB-203ENST00000420692 ZNF638Q14966 1978 aaKnown RBP16.82■□□□□ 0.28
CTSB-203ENST00000420692 TSHRP16473 764 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 CYP2F1P24903 491 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 NCALDP61601 193 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 DPYSL2Q16555 572 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 CCL14Q16627 93 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 PRPF39Q86UA1 669 aaKnown RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 OSTM1Q86WC4 334 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 VSIG1Q86XK7 387 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 CCDC33Q8N5R6 958 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 CCDC185Q8N715 623 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 SLC2A14Q8TDB8 520 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 KLF6Q99612 283 aaPredicted RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 ZNF670Q9BS34 389 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 TRIM6Q9C030 488 aaPredicted RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 SSU72Q9NP77 194 aaKnown RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 MFHAS1Q9Y4C4 1052 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 KCNE1P15382 129 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 PSEN2P49810 448 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 YWHAZP63104 245 aaKnown RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 BST2Q10589 180 aaKnown RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 BNIP1Q12981 228 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 KLHL38Q2WGJ6 581 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 SH2D5Q6ZV89 423 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 TLK2Q86UE8 772 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 FAM228AQ86W67 206 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 ZDHHC17Q8IUH5 632 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 BANPQ8N9N5 519 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 SMG8Q8ND04 991 aaKnown RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 CCDC110Q8TBZ0 833 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 THOC1Q96FV9 657 aaKnown RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 KCTD15Q96SI1 283 aaPredicted RBP16.81■□□□□ 0.28
CTSB-203ENST00000420692 PAK5Q9P286 719 aa16.81■□□□□ 0.28
CTSB-203ENST00000420692 GOLGA8RI6L899 631 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 MSH2P43246 934 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 MAGEA6P43360 314 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 BCAT1P54687 386 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 BEX3Q00994 111 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 PCBP1Q15365 356 aaKnown RBP eCLIP16.8■□□□□ 0.284e-8■■■□□ 17.6
CTSB-203ENST00000420692 KBTBD12Q3ZCT8 623 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 RNF43Q68DV7 783 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 LVRNQ6Q4G3 990 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 ETNK1Q9HBU6 452 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 ETNK2Q9NVF9 386 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 PHTF1Q9UMS5 762 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 STARD13Q9Y3M8 1113 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 ZNF487B1APH4 448 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms