RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 THAP9Q9H5L6 903 aa13.38□□□□□ -0.27
HMGN1P4-201ENST00000419500 CLIC5Q9NZA1 410 aa13.38□□□□□ -0.27
HMGN1P4-201ENST00000419500 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
HMGN1P4-201ENST00000419500 NUDT5Q9UKK9 219 aa13.38□□□□□ -0.27
HMGN1P4-201ENST00000419500 USP3Q9Y6I4 520 aa13.38□□□□□ -0.27
HMGN1P4-201ENST00000419500 CFAP54Q96N23 3096 aa13.38□□□□□ -0.27
HMGN1P4-201ENST00000419500 BRD2P25440 801 aaKnown RBP13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 PLA2G4AP47712 749 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 MFAP3P55082 362 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 YWHAGP61981 247 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 RAB41Q5JT25 222 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 LY6G5CQ5SRR4 150 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 BTBD8Q5XKL5 378 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 SCD5Q86SK9 330 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 MIB1Q86YT6 1006 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 BBS7Q8IWZ6 715 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 ZBTB44Q8NCP5 570 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 UBA3Q8TBC4 463 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 FAM81BQ96LP2 452 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 CRACR2AQ9BSW2 395 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 ULBP1Q9BZM6 244 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 FBRSL1Q9HCM7 1045 aaKnown RBP13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 UBE2TQ9NPD8 197 aaPredicted RBP13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 APEX2Q9UBZ4 518 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 RASAL2Q9UJF2 1139 aa13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGN1P4-201ENST00000419500 GTPBP10A4D1E9 387 aaKnown RBP13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 TULP2O00295 520 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 MDM4O15151 490 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 PAPSS2O95340 614 aaPredicted RBP13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 OPRD1P41143 372 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 EIF2DP41214 584 aaKnown RBP13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 GAD2Q05329 585 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 EFEMP1Q12805 493 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 MAN2A1Q16706 1144 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 EXOC3L4Q17RC7 722 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 ANO4Q32M45 955 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 LCLAT1Q6UWP7 414 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 IRF2BP1Q8IU81 584 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 RPLP0P6Q8NHW5 317 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 GPT2Q8TD30 523 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 TFAP2BQ92481 460 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 ACDQ96AP0 544 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 KREMEN1Q96MU8 473 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 HINFPQ9BQA5 517 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 SPHK2Q9NRA0 654 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 STRIP2Q9ULQ0 834 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 CACNA1IQ9P0X4 2223 aa13.36□□□□□ -0.27
HMGN1P4-201ENST00000419500 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 MED7O43513 233 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 MBD3O95983 291 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 TDGF1P13385 188 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 LCP1P13796 627 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 SLC9A1P19634 815 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 RGS7P49802 495 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 ZNF132P52740 706 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 SEC13P55735 322 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 COG7P83436 770 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 CNGA2Q16280 664 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 PREPLQ4J6C6 727 aaPredicted RBP13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 PM20D1Q6GTS8 502 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 PKN3Q6P5Z2 889 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 RHBDF2Q6PJF5 856 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 ZNF276Q8N554 614 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 RNF139Q8WU17 664 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 GOLGA1Q92805 767 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 NELL1Q92832 810 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 SECISBP2LQ93073 1101 aaKnown RBP13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 WBP2Q969T9 261 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 PNKPQ96T60 521 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 CNGB3Q9NQW8 809 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 ARHGEF4Q9NR80 690 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 OLA1Q9NTK5 396 aaKnown RBP13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 MARCH2Q9P0N8 246 aa13.35□□□□□ -0.27
HMGN1P4-201ENST00000419500 FANCMQ8IYD8 2048 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 CHURC1-FNTBB4DL54 471 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 K7ESF4 209 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 HOXC11O43248 304 aaPredicted RBP13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 CALCAP01258 141 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 APODP05090 189 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 HMBSP08397 361 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 GNA15P30679 374 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 USP8P40818 1118 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 KDSRQ06136 332 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 KCNJ12Q14500 433 aa13.34□□□□□ -0.27
HMGN1P4-201ENST00000419500 ARHGAP44Q17R89 818 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms