RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 RAB4AP20338 218 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 FGFR3P22607 806 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 TPI1P60174 286 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 DENND5AQ6IQ26 1287 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 TPRKBQ9Y3C4 175 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ASNSP08243 561 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 CYP11B1P15538 503 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 RFC5P40937 340 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 PDX1P52945 283 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 PKN1Q16512 942 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ATAD3CQ5T2N8 411 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 FSTL5Q8N475 847 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 OR5T3Q8NGG3 340 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ZNF564Q8TBZ8 553 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ZNF471Q9BX82 626 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 CRISPLD1Q9H336 500 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 GPN1Q9HCN4 374 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 COMMD8Q9NX08 183 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 KCNQ3O43525 872 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 BCAMP50895 628 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 GPC5P78333 572 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 PTK7Q13308 1070 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 SNRNP48Q6IEG0 339 aaKnown RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 TMEM270Q6UE05 265 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 SPATA2LQ8IUW3 424 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 SRFBP1Q8NEF9 429 aaKnown RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 BEST2Q8NFU1 509 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ZNF649Q9BS31 505 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 SP140LQ9H930 580 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 MAN1B1Q9UKM7 699 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 IFNA6P05013 189 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 PABPC1P11940 636 aaKnown RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 MTM1Q13496 603 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 MTSS1LQ765P7 747 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 FANCBQ8NB91 859 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 OR2L3Q8NG85 312 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 PTPRHQ9HD43 1115 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 CRNNQ9UBG3 495 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 PCDHA7Q9UN72 937 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 OR5F1O95221 314 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 RD3Q7Z3Z2 195 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ZZZ3Q8IYH5 903 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 GIPC3Q8TF64 312 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 USP7Q93009 1102 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ITCHQ96J02 903 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 CDY2AQ9Y6F7 541 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 CDY1Q9Y6F8 540 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ATXN2Q99700 1313 aaKnown RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 STAT4Q14765 748 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 RNF151Q2KHN1 245 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 UAP1L1Q3KQV9 507 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 LACTB2Q53H82 288 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 PRCCQ92733 491 aaPredicted RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 EXOC2Q96KP1 924 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ZNF354BQ96LW1 612 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 SMG5Q9UPR3 1016 aaKnown RBP12.13□□□□□ -0.47
DSP-202ENST00000418664 SOGA1O94964 1423 aa12.13□□□□□ -0.47
DSP-202ENST00000418664 SDC4P31431 198 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 CRELD1Q96HD1 420 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 ATXN3LQ9H3M9 355 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 RSL24D1Q9UHA3 163 aaKnown RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 STAP1Q9ULZ2 295 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 DHRS7Q9Y394 339 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 SLC26A4O43511 780 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 CCNKO75909 580 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 SULT1E1P49888 294 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 PEX3P56589 373 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 C11orf57Q6ZUT1 292 aaPredicted RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 SETD9Q8NE22 299 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 FATE1Q969F0 183 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 MED8Q96G25 268 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 TDRD1Q9BXT4 1180 aaKnown RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 MIEF1Q9NQG6 463 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 BNC2Q6ZN30 1099 aaPredicted RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 BRINP3Q76B58 766 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 ZNF554Q86TJ5 538 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 PHC2Q8IXK0 858 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 DSCC1Q9BVC3 393 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 ALKBH4Q9NXW9 302 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 BCAS1O75363 584 aaPredicted RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 NQO1P15559 274 aaKnown RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 GNB3P16520 340 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 HSD17B4P51659 736 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 CDH6P55285 790 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 DPCR1Q3MIW9 517 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 C14orf166Q9Y224 244 aaKnown RBP12.12□□□□□ -0.47
DSP-202ENST00000418664 PADI2Q9Y2J8 665 aa12.12□□□□□ -0.47
DSP-202ENST00000418664 AP1M2Q9Y6Q5 423 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms