RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MED15Q96RN5 788 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 PNKPQ96T60 521 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 LSM7Q9UK45 103 aaKnown RBP17.32■□□□□ 0.36
LINC00404-201ENST00000418660 NUDT5Q9UKK9 219 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 MYO16Q9Y6X6 1858 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 CCDC163A0A0D9SF12 145 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 K7EQS6 105 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 HRO43593 1189 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 SETSIPP0DME0 302 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 TKTL1P51854 596 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 BTBD8Q5XKL5 378 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 PM20D1Q6GTS8 502 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 LCLAT1Q6UWP7 414 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 RRAGAQ7L523 313 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 SYT13Q7L8C5 426 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 WDR5BQ86VZ2 330 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 ARHGEF19Q8IW93 802 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 CAMKK1Q8N5S9 505 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 UBA3Q8TBC4 463 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 ACDQ96AP0 544 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 CNOT6LQ96LI5 555 aaKnown RBP17.31■□□□□ 0.36
LINC00404-201ENST00000418660 HINFPQ9BQA5 517 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 INTS2Q9H0H0 1204 aaKnown RBP17.31■□□□□ 0.36
LINC00404-201ENST00000418660 SPHK2Q9NRA0 654 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 NCDNQ9UBB6 729 aa17.31■□□□□ 0.36
LINC00404-201ENST00000418660 A0A0A0MRY4 1105 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.3■□□□□ 0.36
LINC00404-201ENST00000418660 RNF225M0QZC1 329 aaPredicted RBP17.3■□□□□ 0.36
LINC00404-201ENST00000418660 TULP2O00295 520 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 MDM4O15151 490 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 HOXC11O43248 304 aaPredicted RBP17.3■□□□□ 0.36
LINC00404-201ENST00000418660 ZBED1O96006 694 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 APODP05090 189 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 HOXC13P31276 330 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00404-201ENST00000418660 STILQ15468 1287 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 CNGA2Q16280 664 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 PKDCCQ504Y2 493 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 C12orf40Q86WS4 652 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 TMEM25Q86YD3 366 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 USP33Q8TEY7 942 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 KCTD13Q8WZ19 329 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 TFAP2BQ92481 460 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 SECISBP2LQ93073 1101 aaKnown RBP17.3■□□□□ 0.36
LINC00404-201ENST00000418660 ULBP1Q9BZM6 244 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 LRRC4Q9HBW1 653 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 RAB23Q9ULC3 237 aa17.3■□□□□ 0.36
LINC00404-201ENST00000418660 DMDP11532 3685 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 KAT7O95251 611 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 GRIA2P42262 883 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 MRPS21P82921 87 aaKnown RBP17.29■□□□□ 0.36
LINC00404-201ENST00000418660 COG7P83436 770 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 SIM2Q14190 667 aaPredicted RBP17.29■□□□□ 0.36
LINC00404-201ENST00000418660 DMC1Q14565 340 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 MIB1Q86YT6 1006 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 IRF2BP1Q8IU81 584 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 ETFBKMTQ8IXQ9 262 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 DCLK2Q8N568 766 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 RBBP8NLQ8NC74 664 aaPredicted RBP17.29■□□□□ 0.36
LINC00404-201ENST00000418660 KREMEN1Q96MU8 473 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 NUP62CLQ9H1M0 184 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 ARHGEF4Q9NR80 690 aa17.29■□□□□ 0.36
LINC00404-201ENST00000418660 POLR3BQ9NW08 1133 aaPredicted RBP17.29■□□□□ 0.36
LINC00404-201ENST00000418660 STC2O76061 302 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 TNFRSF4P43489 277 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 PXNP49023 591 aaPredicted RBP17.28■□□□□ 0.36
LINC00404-201ENST00000418660 ZNF132P52740 706 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 SEC13P55735 322 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 ADIGQ0VDE8 80 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 MESP2Q0VG99 397 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 EFEMP1Q12805 493 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 SRSF5Q13243 272 aaKnown RBP17.28■□□□□ 0.36
LINC00404-201ENST00000418660 TPD52L1Q16890 204 aaPredicted RBP17.28■□□□□ 0.36
LINC00404-201ENST00000418660 ANO4Q32M45 955 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 PREPLQ4J6C6 727 aaPredicted RBP17.28■□□□□ 0.36
LINC00404-201ENST00000418660 C2orf27AQ580R0 203 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 LAIR1Q6GTX8 287 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 Q6ZNB5 142 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 PRR23BQ6ZRT6 265 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 RSRC2Q7L4I2 434 aaKnown RBP17.28■□□□□ 0.36
LINC00404-201ENST00000418660 BHLHA9Q7RTU4 235 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 SIX6OS1Q8N1H7 587 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 NAT16Q8N8M0 369 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 SLC35F5Q8WV83 523 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 ZSWIM1Q9BR11 485 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 UBE2TQ9NPD8 197 aaPredicted RBP17.28■□□□□ 0.36
LINC00404-201ENST00000418660 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 WDR35Q9P2L0 1181 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 DEC1Q9P2X7 70 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 RASAL2Q9UJF2 1139 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 STRIP2Q9ULQ0 834 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00404-201ENST00000418660 CNTN6Q9UQ52 1028 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 ZNF510Q9Y2H8 683 aa17.28■□□□□ 0.36
LINC00404-201ENST00000418660 RIF1Q5UIP0 2472 aaKnown RBP17.27■□□□□ 0.36
LINC00404-201ENST00000418660 TULP3O75386 442 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 BRD2P25440 801 aaKnown RBP17.27■□□□□ 0.36
LINC00404-201ENST00000418660 KDSRQ06136 332 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 HSF5Q4G112 596 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms