RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RGS5O15539 181 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 FBXO21O94952 628 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 DUX4L2P0CJ85 424 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 DUX4L3P0CJ86 424 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 DUX4L4P0CJ87 422 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 DUX4L5P0CJ88 424 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 DUX4L6P0CJ89 424 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 DUX4L7P0CJ90 424 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 GRK4P32298 578 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 CASP4P49662 377 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 KLHDC7AQ5VTJ3 777 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 CES5AQ6NT32 575 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 OSCP1Q8WVF1 389 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 DUX4Q9UBX2 424 aa11.56□□□□□ -0.56
PTCH1-205ENST00000418258 TIMM13Q9Y5L4 95 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-205ENST00000418258 SGPL1O95470 568 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 MDH1P40925 334 aaKnown RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 TKTL1P51854 596 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 UBP1Q9NZI7 540 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 LOC100653049A0A140TA62 436 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 KRT34O76011 436 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 ABCB1P08183 1280 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 PCNX4Q63HM2 1172 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 ICE2Q659A1 982 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 ZCCHC8Q6NZY4 707 aaKnown RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 RASGRP2Q7LDG7 609 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 EXD1Q8NHP7 514 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 SOCS4Q8WXH5 440 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 SGSM3Q96HU1 749 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 OMDQ99983 421 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 CCDC134Q9H6E4 229 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 SYBUQ9NX95 663 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 CYP39A1Q9NYL5 469 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 TMEM120BA0PK00 339 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 M0R3G1 203 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 RAD51CO43502 376 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 DDNO94850 711 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 NOS3P29474 1203 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 CCR1P32246 355 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 DSG3P32926 999 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 ELAVL2Q12926 359 aaKnown RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 HLA-DQA1Q5Y7H0 255 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 CNBD2Q96M20 576 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 SMPD4Q9NXE4 827 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 DIP2AQ14689 1571 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 NEXMIFQ5QGS0 1516 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 PDZK1P1A8MUH7 402 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 CSF1RP07333 972 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 GHRP10912 638 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 STIP1P31948 543 aaKnown RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 C2CD6Q53TS8 623 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 FBXO47Q5MNV8 452 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 STRA8Q7Z7C7 330 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 DPP10Q8N608 796 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 EDEM1Q92611 657 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 TMEM176AQ96HP8 235 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 PNMA5Q96PV4 448 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 APOL2Q9BQE5 337 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 THAP2Q9H0W7 228 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 EPB41L4AQ9HCS5 686 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 EVA1BQ9NVM1 165 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 USP1O94782 785 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 COILP38432 576 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 NPTX2P47972 431 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 KYNUQ16719 465 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 SH2D3CQ8N5H7 860 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 FICDQ9BVA6 458 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 SPG21Q9NZD8 308 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 NR2E3Q9Y5X4 410 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 ADORA2AP29274 412 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 NUMA1Q14980 2115 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 TCEA2Q15560 299 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 CBWD3Q5JTY5 395 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 CBWD5Q5RIA9 395 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 PTAR1Q7Z6K3 402 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 PDGFDQ9GZP0 370 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-205ENST00000418258 PCDHB5Q9Y5E4 795 aa11.55□□□□□ -0.56
PTCH1-205ENST00000418258 FEN1P39748 380 aaKnown RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TXNRD3Q86VQ6 643 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 AGO4Q9HCK5 861 aaKnown RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 DRG1Q9Y295 367 aaKnown RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TIMM44O43615 452 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 POU1F1P28069 291 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 PPP2R1BP30154 601 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 FNTAP49354 379 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ADIGQ0VDE8 80 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 DOK6Q6PKX4 331 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 FAM131BQ86XD5 332 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 MTERF3Q96E29 417 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 CGRRF1Q99675 332 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ZNF711Q9Y462 761 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TRIM49D1C9J1S8 452 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TMEM253P0C7T8 217 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ARP10275 920 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 KLRK1P26718 216 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 PON1P27169 355 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 WLSQ5T9L3 541 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms