RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 HTR3DQ70Z44 454 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 ZNF513Q8N8E2 541 aaPredicted RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 TERB1Q8NA31 727 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 WBP2Q969T9 261 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 JAKMIP2Q96AA8 810 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 SPATA32Q96LK8 384 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 TMEM9BQ9NQ34 198 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 CYLDQ9NQC7 956 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 LSM7Q9UK45 103 aaKnown RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 HPSEQ9Y251 543 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 MYO16Q9Y6X6 1858 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 MAPK13O15264 365 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 TBX18O95935 607 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 NR2F2P24468 414 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 ATP5C1P36542 298 aaKnown RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 SYKP43405 635 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 SHC2P98077 582 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 INCA1Q0VD86 236 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 C1orf220Q5T0J3 134 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 GRAMD4Q6IC98 578 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 CLEC20AQ6ZU45 233 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 INTS8Q75QN2 995 aaKnown RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 ARMCX6Q7L4S7 300 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 GPRIN1Q7Z2K8 1008 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 TMEFF1Q8IYR6 380 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 CYFIP2Q96F07 1278 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 TWNKQ96RR1 684 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 HNRNPABQ99729 332 aaKnown RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 NT5C1AQ9BXI3 368 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 KLF16Q9BXK1 252 aaPredicted RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 CYP3A43Q9HB55 503 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 DNAJC17Q9NVM6 304 aaKnown RBP15.24■□□□□ 0.03
PAF1-202ENST00000416728 SCML2Q9UQR0 700 aa15.24■□□□□ 0.03
PAF1-202ENST00000416728 NEDD8-MDP1E9PL57 170 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 CYP26A1O43174 497 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 TRIM49P0CI25 452 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 TRIM49CP0CI26 452 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 KRT13P13646 458 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
PAF1-202ENST00000416728 GCLMP48507 274 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 KRT85P78386 507 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 IRX4P78413 519 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 MAP7D1Q3KQU3 841 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 SPDYCQ5MJ68 293 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 FRMD1Q8N878 549 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 CCDC150Q8NCX0 1101 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 TAS1R2Q8TE23 839 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 XPO6Q96QU8 1125 aaKnown RBP15.23■□□□□ 0.03
PAF1-202ENST00000416728 BBS2Q9BXC9 721 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 DNAI2Q9GZS0 605 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 NIF3L1Q9GZT8 377 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 PNPLA8Q9NP80 782 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 EVLQ9UI08 416 aaPredicted RBP15.23■□□□□ 0.03
PAF1-202ENST00000416728 PCDHA5Q9Y5H7 936 aa15.23■□□□□ 0.03
PAF1-202ENST00000416728 HHLA1C9JL84 531 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 TRIM24O15164 1050 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 ZBTB24O43167 697 aaPredicted RBP15.22■□□□□ 0.03
PAF1-202ENST00000416728 CACNG3O60359 315 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 GREM1O60565 184 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 RHOBTB3O94955 611 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 HOXB2P14652 356 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 TYRP14679 529 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 CD58P19256 250 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 RPL13P26373 211 aaKnown RBP15.22■□□□□ 0.03
PAF1-202ENST00000416728 NTSR1P30989 418 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 DPP6P42658 865 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 PTGER3P43115 390 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 LMAN2Q12907 356 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 NFIL3Q16649 462 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 TRIM61Q5EBN2 209 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 SH3PXD2AQ5TCZ1 1133 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 LYSMD4Q5XG99 296 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 KLHDC10Q6PID8 442 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 TPGS1Q6ZTW0 290 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 SYT12Q8IV01 421 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 FAM186BQ8IYM0 893 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 NUSAP1Q9BXS6 441 aaKnown RBP15.22■□□□□ 0.03
PAF1-202ENST00000416728 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 APOBEC3GQ9HC16 384 aaKnown RBP15.22■□□□□ 0.03
PAF1-202ENST00000416728 OSER1Q9NX31 292 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 WDR35Q9P2L0 1181 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 MBD1Q9UIS9 605 aaPredicted RBP15.22■□□□□ 0.03
PAF1-202ENST00000416728 MAPK8IP1Q9UQF2 711 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 STARD13Q9Y3M8 1113 aa15.22■□□□□ 0.03
PAF1-202ENST00000416728 ABCA7Q8IZY2 2146 aa15.21■□□□□ 0.03
PAF1-202ENST00000416728 A0A1W2PQH9 124 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 CDX4O14627 284 aaPredicted RBP15.21■□□□□ 0.02
PAF1-202ENST00000416728 CILPO75339 1184 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 RARGP13631 454 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 GABRG2P18507 467 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 PSMC2P35998 433 aaKnown RBP15.21■□□□□ 0.02
PAF1-202ENST00000416728 WASP42768 502 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 NDUFA8P51970 172 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 ENPEPQ07075 957 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 UAP1L1Q3KQV9 507 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 C10orf120Q5SQS8 335 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 EGFLAMQ63HQ2 1017 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms