RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 NACA2Q9H009 215 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 SUSD2Q9UGT4 822 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 R3HCC1Q9Y3T6 440 aaKnown RBP9.94□□□□□ -0.82
LINC01238-201ENST00000416204 RAI2Q9Y5P3 530 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 PTPRBP23467 1997 aa9.94□□□□□ -0.82
LINC01238-201ENST00000416204 PLK4O00444 970 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 PPP1R37O75864 691 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 TNNC2P02585 160 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 TYRP14679 529 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 PFKLP17858 780 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 PTPN1P18031 435 aaKnown RBP9.93□□□□□ -0.82
LINC01238-201ENST00000416204 SCP2P22307 547 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 WARSP23381 471 aaKnown RBP9.93□□□□□ -0.82
LINC01238-201ENST00000416204 MATKP42679 507 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 ABCG1P45844 678 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 CSNK1EP49674 416 aaKnown RBP9.93□□□□□ -0.82
LINC01238-201ENST00000416204 MAPRE1Q15691 268 aaKnown RBP9.93□□□□□ -0.82
LINC01238-201ENST00000416204 FUT11Q495W5 492 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 HECTD3Q5T447 861 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 L1TD1Q5T7N2 865 aaKnown RBP9.93□□□□□ -0.82
LINC01238-201ENST00000416204 DHRS13Q6UX07 377 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 LIMS2Q7Z4I7 341 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 GLRX5Q86SX6 157 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 CBWD2Q8IUF1 395 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 P2RY11Q96G91 374 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 ANKRD36BP1Q96IX9 119 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 C8orf48Q96LL4 319 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 MED10Q9BTT4 135 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 MKRN2Q9H000 416 aaKnown RBP9.93□□□□□ -0.82
LINC01238-201ENST00000416204 ST6GALNAC4Q9H4F1 302 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 INTS13Q9NVM9 706 aa9.93□□□□□ -0.82
LINC01238-201ENST00000416204 EIF2B4Q9UI10 523 aaKnown RBP9.93□□□□□ -0.82
LINC01238-201ENST00000416204 ZNF462Q96JM2 2506 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 ATMQ13315 3056 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 MDM4O15151 490 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 BCAT2O15382 392 aaPredicted RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 PRPF6O94906 941 aaKnown RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 CLSTN1O94985 981 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 PLA2G2AP14555 144 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 IDEP14735 1019 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 EIF2S3P41091 472 aaKnown RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 PPP3CCP48454 512 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 SEMG2Q02383 582 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 ORC1Q13415 861 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 ARL6IP4Q66PJ3 421 aaKnown RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 NUDT18Q6ZVK8 323 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 NUP93Q8N1F7 819 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 KCTD17Q8N5Z5 321 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 RDH13Q8NBN7 331 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 BAHD1Q8TBE0 780 aaPredicted RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 HPS3Q969F9 1004 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 JAKMIP2Q96AA8 810 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 EPSTI1Q96J88 318 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 UBL7Q96S82 380 aaPredicted RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 GABRG3Q99928 467 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 STRA6Q9BX79 667 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 WSB2Q9NYS7 404 aaPredicted RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 EHD2Q9NZN4 543 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 NXF1Q9UBU9 619 aaKnown RBP9.92□□□□□ -0.82
LINC01238-201ENST00000416204 NUDT5Q9UKK9 219 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 EXOC7Q9UPT5 735 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 STARD13Q9Y3M8 1113 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 STON1Q9Y6Q2 735 aa9.92□□□□□ -0.82
LINC01238-201ENST00000416204 GOLGA4Q13439 2230 aaKnown RBP9.91□□□□□ -0.82
LINC01238-201ENST00000416204 MGAQ8IWI9 3026 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 A0A087WV48 116 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 A8MXQ7 604 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 H3BQV1 296 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 CBX4O00257 560 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 GREM1O60565 184 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 CER1O95813 267 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 CST3P01034 146 aaPredicted RBP9.91□□□□□ -0.82
LINC01238-201ENST00000416204 DLATP10515 647 aaKnown RBP9.91□□□□□ -0.82
LINC01238-201ENST00000416204 ABCD1P33897 745 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 IL12RB1P42701 662 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 DGKGP49619 791 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 TPMTP51580 245 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 SLC5A3P53794 718 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 CDH8P55286 799 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 POU5F1Q01860 360 aaKnown RBP9.91□□□□□ -0.82
LINC01238-201ENST00000416204 KIF19Q2TAC6 998 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 LARP1BQ659C4 914 aaKnown RBP9.91□□□□□ -0.82
LINC01238-201ENST00000416204 SCARA5Q6ZMJ2 495 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 SCUBE3Q8IX30 993 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 GPD1LQ8N335 351 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 KCNV2Q8TDN2 545 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 SORCS1Q8WY21 1168 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 DNASE2BQ8WZ79 361 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 HVCN1Q96D96 273 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 OTUB2Q96DC9 234 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 ZSCAN31Q96LW9 406 aaPredicted RBP9.91□□□□□ -0.82
LINC01238-201ENST00000416204 AK8Q96MA6 479 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 PANK2Q9BZ23 570 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 ZDHHC5Q9C0B5 715 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 ELOVL4Q9GZR5 314 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 SMYD3Q9H7B4 428 aa9.91□□□□□ -0.82
LINC01238-201ENST00000416204 KIAA1522Q9P206 1035 aaPredicted RBP9.91□□□□□ -0.82
LINC01238-201ENST00000416204 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms