RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ANKRD26Q9UPS8 1709 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 SOAT2O75908 522 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 MLNP12872 115 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 POM121L1PQ3SYA9 428 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 TPGS1Q6ZTW0 290 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 ZNF614Q8N883 585 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 YIPF3Q9GZM5 350 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 TDRKHQ9Y2W6 561 aaKnown RBP10.96□□□□□ -0.65
COL12A1-203ENST00000416123 LRRIQ3A6PVS8 624 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-203ENST00000416123 CXCL11O14625 94 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 PPP1R37O75864 691 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 STAU1O95793 577 aaKnown RBP10.96□□□□□ -0.65
COL12A1-203ENST00000416123 LSP1P33241 339 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 PLOD1Q02809 727 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-203ENST00000416123 PDK2Q15119 407 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 GTF3C4Q9UKN8 822 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 PHLPP1O60346 1717 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 TBC1D4O60343 1298 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 PRKCQQ04759 706 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 MAPK7Q13164 816 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 NBPF20Q3BBV1 942 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 C10orf53Q8N6V4 93 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 OR9Q1Q8NGQ5 310 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 SOCS4Q8WXH5 440 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 ADAM2Q99965 735 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 EIF2AQ9BY44 585 aaKnown RBP10.96□□□□□ -0.65
COL12A1-203ENST00000416123 UBXN6Q9BZV1 441 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 PTPRHQ9HD43 1115 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 SDR42E2A6NKP2 422 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 MRNIPQ6NTE8 343 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 USP50Q70EL3 339 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-203ENST00000416123 ITIH5Q86UX2 942 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 SEMA4DQ92854 862 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 ECSITQ9BQ95 431 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 ADGRE3Q9BY15 652 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 CLPBQ9H078 707 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 MORC2Q9Y6X9 1032 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-203ENST00000416123 CYTH3O43739 400 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 TBX4P57082 545 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 GJC2Q5T442 439 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-203ENST00000416123 VMP1Q96GC9 406 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 SERAC1Q96JX3 654 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 MYO10Q9HD67 2058 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 O00370 1275 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 TTLL9Q3SXZ7 439 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 GRAMD4Q6IC98 578 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 USP13Q92995 863 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-203ENST00000416123 FAM198AQ9UFP1 575 aa10.96□□□□□ -0.66
COL12A1-203ENST00000416123 IRF6O14896 467 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 NUDT2P50583 147 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 ZNF284Q2VY69 593 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CES3Q6UWW8 571 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 EME1Q96AY2 570 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 KLC4Q9NSK0 619 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 VPS26AO75436 327 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 AMHP03971 560 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SLC2A14Q8TDB8 520 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CNPY3Q9BT09 278 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 THUMPD3Q9BV44 507 aaKnown RBP10.95□□□□□ -0.66
COL12A1-203ENST00000416123 IPPQ9Y573 584 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 PCDHB5Q9Y5E4 795 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 DCCP43146 1447 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SALL1Q9NSC2 1324 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 NDUFB5O43674 189 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 ADCY3O60266 1144 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 TUBP50607 506 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SEC24CP53992 1094 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 TRPM4Q8TD43 1214 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 INPP5DQ92835 1189 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 TUBGCP3Q96CW5 907 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CMTM5Q96DZ9 223 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 VANGL2Q9ULK5 521 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CFAP73A6NFT4 308 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 ALOX15P16050 662 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-203ENST00000416123 PTPRAP18433 802 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CCR1P32246 355 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 NFIL3Q16649 462 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 FBXW10Q5XX13 1052 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SPOCD1Q6ZMY3 1216 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 VTA1Q9NP79 307 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 RBM22Q9NW64 420 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL12A1-203ENST00000416123 KANSL3Q9P2N6 904 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 HES2Q9Y543 173 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CDY2AQ9Y6F7 541 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CDY1Q9Y6F8 540 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 ERI2A8K979 691 aaKnown RBP10.95□□□□□ -0.66
COL12A1-203ENST00000416123 KATNA1O75449 491 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 RECQL4O94761 1208 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 AGBL2Q5U5Z8 902 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 KIAA1257Q9ULG3 409 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 MYH11P35749 1972 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 DISP2A7MBM2 1401 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 UBR1Q8IWV7 1749 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 hCG_2014768A0A024R1R8 64 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 B2RBV5 119 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 GOLGA8TH3BQL2 631 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SPAG6O75602 509 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 CCL23P55773 120 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SLC27A1Q6PCB7 646 aa10.95□□□□□ -0.66
COL12A1-203ENST00000416123 SMARCD1Q96GM5 515 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms