RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TNIP3Q96KP6 325 aa16.31■□□□□ 0.2
DDX56-202ENST00000415758 USP28Q96RU2 1077 aa16.31■□□□□ 0.2
DDX56-202ENST00000415758 GABRG3Q99928 467 aa16.31■□□□□ 0.2
DDX56-202ENST00000415758 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
DDX56-202ENST00000415758 DMAP1Q9NPF5 467 aaPredicted RBP16.31■□□□□ 0.2
DDX56-202ENST00000415758 NXF1Q9UBU9 619 aaKnown RBP16.31■□□□□ 0.2
DDX56-202ENST00000415758 LHX6Q9UPM6 363 aa16.31■□□□□ 0.2
DDX56-202ENST00000415758 UBE4BO95155 1302 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 TAF4O00268 1085 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 ZBTB24O43167 697 aaPredicted RBP16.3■□□□□ 0.2
DDX56-202ENST00000415758 NDUFV2P19404 249 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 SYT1P21579 422 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 AMPD3Q01432 767 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 EHHADHQ08426 723 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 ACAP1Q15027 740 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 EGFLAMQ63HQ2 1017 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 GRAMD4Q6IC98 578 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 SDE2Q6IQ49 451 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 CHCHD4Q8N4Q1 142 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 SCFD1Q8WVM8 642 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 SMARCD1Q96GM5 515 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 ACOX2Q99424 681 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 FAM124BQ9H5Z6 455 aaPredicted RBP16.3■□□□□ 0.2
DDX56-202ENST00000415758 CSNK1G1Q9HCP0 422 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 MARK1Q9P0L2 795 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 GMIPQ9P107 970 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 WDR35Q9P2L0 1181 aa16.3■□□□□ 0.2
DDX56-202ENST00000415758 GFRA2O00451 464 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 CLIC2O15247 247 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 TLR5O60602 858 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 WASP42768 502 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
DDX56-202ENST00000415758 CDH8P55286 799 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 CLDN10P78369 228 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 FAM26FQ5R3K3 315 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 PROSER1Q86XN7 944 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 CHPFQ8IZ52 775 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 FUKQ8N0W3 1084 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 ZMIZ2Q8NF64 920 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 XPO6Q96QU8 1125 aaKnown RBP16.29■□□□□ 0.2
DDX56-202ENST00000415758 KLF16Q9BXK1 252 aaPredicted RBP16.29■□□□□ 0.2
DDX56-202ENST00000415758 FBXO44Q9H4M3 255 aa16.29■□□□□ 0.2
DDX56-202ENST00000415758 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
DDX56-202ENST00000415758 DNAJC17Q9NVM6 304 aaKnown RBP16.29■□□□□ 0.2
DDX56-202ENST00000415758 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
DDX56-202ENST00000415758 NBEAQ8NFP9 2946 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 PRRT4C9JH25 899 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 CISD3P0C7P0 127 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 TYRP14679 529 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 PGFP49763 221 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 CYP2J2P51589 502 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 AP3M2P53677 418 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 TRIP6Q15654 476 aaKnown RBP16.28■□□□□ 0.2
DDX56-202ENST00000415758 METTL3Q86U44 580 aaKnown RBP16.28■□□□□ 0.2
DDX56-202ENST00000415758 OR2I1PQ8NGU4 316 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 ADAMTS14Q8WXS8 1223 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 FOXJ1Q92949 421 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 MRGPRX1Q96LB2 322 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 HSPA12BQ96MM6 686 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 SMOQ99835 787 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 C7orf25Q9BPX7 421 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 MED10Q9BTT4 135 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 BBS2Q9BXC9 721 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 NACA2Q9H009 215 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 CYLDQ9NQC7 956 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 TLR8Q9NR97 1041 aaKnown RBP16.28■□□□□ 0.2
DDX56-202ENST00000415758 SUSD2Q9UGT4 822 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 CYP8B1Q9UNU6 501 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 NFE2L3Q9Y4A8 694 aa16.28■□□□□ 0.2
DDX56-202ENST00000415758 NEDD8-MDP1E9PL57 170 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 SH3BP5O60239 455 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 PHACTR2O75167 634 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 AP1G2O75843 785 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 BEST1O76090 585 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 IRF1P10914 325 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 ASIC1P78348 528 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 BMT2Q1RMZ1 405 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 PLEKHG6Q3KR16 790 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 ZNF667Q5HYK9 610 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 SYCP2LQ5T4T6 812 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 KLHDC10Q6PID8 442 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 ZDHHC5Q9C0B5 715 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 ZSCAN16Q9H4T2 348 aaPredicted RBP16.27■□□□□ 0.2
DDX56-202ENST00000415758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.22e-10■■■■■ 195.6
DDX56-202ENST00000415758 FBXO10Q9UK96 956 aa16.27■□□□□ 0.2
DDX56-202ENST00000415758 MYH10P35580 1976 aa16.27■□□□□ 0.19
DDX56-202ENST00000415758 ADAMTS20P59510 1910 aa16.26■□□□□ 0.19
DDX56-202ENST00000415758 ITPR1Q14643 2758 aa16.26■□□□□ 0.19
DDX56-202ENST00000415758 TBX18O95935 607 aa16.26■□□□□ 0.19
DDX56-202ENST00000415758 C4BPAP04003 597 aaKnown RBP16.26■□□□□ 0.19
DDX56-202ENST00000415758 GNSP15586 552 aa16.26■□□□□ 0.19
DDX56-202ENST00000415758 ATP5C1P36542 298 aaKnown RBP16.26■□□□□ 0.19
DDX56-202ENST00000415758 ZNF132P52740 706 aa16.26■□□□□ 0.19
DDX56-202ENST00000415758 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
DDX56-202ENST00000415758 WDR45BQ5MNZ6 344 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms