RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 SMARCD1Q96GM5 515 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 SCLYQ96I15 445 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 SLITRK1Q96PX8 696 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 ARHGAP9Q9BRR9 750 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 TMEM175Q9BSA9 504 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 HEMGNQ9BXL5 484 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 PPP1R12CQ9BZL4 782 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 C11orf49Q9H6J7 331 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 LRRC19Q9H756 370 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 TMEM39AQ9NV64 488 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.94□□□□□ -1.3
HDAC8-211ENST00000415409 PCSK1NQ9UHG2 260 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 PCYOX1Q9UHG3 505 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 DNMT3LQ9UJW3 386 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 USP18Q9UMW8 372 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 ATP11BQ9Y2G3 1177 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 PRG3Q9Y2Y8 225 aaPredicted RBP6.94□□□□□ -1.3
HDAC8-211ENST00000415409 NR2E1Q9Y466 385 aa6.94□□□□□ -1.3
HDAC8-211ENST00000415409 WDR81Q562E7 1941 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TCRBV7S2A1N4TA0A589 114 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TTLL8A6PVC2 850 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TBKBP1A7MCY6 615 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CLDN5O00501 218 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 SYN3O14994 580 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TTI1O43156 1089 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 DAB1O75553 588 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 GRAP2O75791 330 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ECEL1O95672 775 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 GAS8O95995 478 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CLTBP09497 229 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TCF4P15884 667 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CYP2C18P33260 490 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 FLT3P36888 993 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CDKN2BP42772 138 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 GJA8P48165 433 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TKTL1P51854 596 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 YWHAZP63104 245 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 MRPS5P82675 430 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ATP11AP98196 1134 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 SLC25A11Q02978 314 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 YWHAHQ04917 246 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ADIGQ0VDE8 80 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ELAVL2Q12926 359 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 IKBKEQ14164 716 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 HLTFQ14527 1009 aaKnown RBP eCLIP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 GPNMBQ14956 572 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 PDK2Q15119 407 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 PPP1R7Q15435 360 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CCNG2Q16589 344 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ATP13A4Q4VNC1 1196 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TFDP3Q5H9I0 405 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 DAB2IPQ5VWQ8 1189 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 KAZNQ674X7 775 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 SCYL2Q6P3W7 929 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 FAM171BQ6P995 826 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 MFSD7Q6UXD7 560 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CD300LGQ6UXG3 332 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 PAQR9Q6ZVX9 377 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 DEFB128Q7Z7B8 93 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 JAMLQ86YT9 394 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 SPATA2LQ8IUW3 424 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ARFGAP1Q8N6T3 406 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CMASQ8NFW8 434 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ATL2Q8NHH9 583 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 AENQ8WTP8 325 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 FAM172AQ8WUF8 416 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 C1orf54Q8WWF1 131 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CASKIN2Q8WXE0 1202 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 RAPGEF5Q92565 580 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 HSPH1Q92598 858 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 FAM149B1Q96BN6 582 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 PCED1BQ96HM7 432 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 CASD1Q96PB1 797 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TBCBQ99426 244 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 SMOQ99835 787 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 HINFPQ9BQA5 517 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 RTP3Q9BQQ7 232 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ERP44Q9BS26 406 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 TRIM62Q9BVG3 475 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 MAK16Q9BXY0 300 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 FRMD8P1Q9BZ68 369 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 DCLK3Q9C098 648 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 PLEKHA4Q9H4M7 779 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 NGRNQ9NPE2 291 aaKnown RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 DMAP1Q9NPF5 467 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-211ENST00000415409 KLHL11Q9NVR0 708 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 ZNF446Q9NWS9 450 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 OGFRQ9NZT2 677 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 STAP1Q9ULZ2 295 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 FAN1Q9Y2M0 1017 aa6.93□□□□□ -1.3
HDAC8-211ENST00000415409 hCG_1818297A0A087WSY0 165 aa6.92□□□□□ -1.3
HDAC8-211ENST00000415409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-211ENST00000415409 ESYT3A0FGR9 886 aa6.92□□□□□ -1.3
HDAC8-211ENST00000415409 OR6C75A6NL08 312 aa6.92□□□□□ -1.3
HDAC8-211ENST00000415409 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms