RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CDHR4A6H8M9 788 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 PABPN1LA6NDY0 278 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 SERPINB2P05120 415 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 GNAI3P08754 354 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CRKLP46109 303 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 PTDSS1P48651 473 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 SLC11A2P49281 568 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 GNAI1P63096 354 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ADGRE1Q14246 886 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 GRM4Q14833 912 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 TBCEQ15813 527 aaPredicted RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 NFIL3Q16649 462 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 FAM214AQ32MH5 1076 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 LRIT3Q3SXY7 679 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CRB2Q5IJ48 1285 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 UBAP2Q5T6F2 1119 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 LINC00114Q6XXX2 140 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 MED25Q71SY5 747 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 GATAD2AQ86YP4 633 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CCDC28AQ8IWP9 274 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 LMNTD2Q8IXW0 634 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 PIK3C3Q8NEB9 887 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 TTLL11Q8NHH1 800 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 IFI44Q8TCB0 444 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 DCAF11Q8TEB1 546 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 LENG1Q96BZ8 264 aaPredicted RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 MRGPRX1Q96LB2 322 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 WDR92Q96MX6 357 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 OR10A5Q9H207 317 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SERINC1Q9NRX5 453 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 XPO7Q9UIA9 1087 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 A0A0A6YYK5 440 aaPredicted RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 VNN1O95497 513 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 GNAI2P04899 355 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ANXA2P07355 339 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 GRPP07492 148 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SPATA31C1P0DKV0 1188 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 HGFP14210 728 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 MUTP22033 750 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 APEX1P27695 318 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 CALRP27797 417 aaKnown RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 PPP5CP53041 499 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 PRMT2P55345 433 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ATP8B2P98198 1209 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 UBE3AQ05086 875 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 MGAT2Q10469 447 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 PTK2BQ14289 1009 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CCDC92Q53HC0 331 aaPredicted RBP2.82□□□□□ -1.96
MCF2-204ENST00000414978 PRAMEF14Q5SWL7 426 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 THEMIS2Q5TEJ8 643 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 RINT1Q6NUQ1 792 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 THAP5Q7Z6K1 395 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 C11orf44Q8N8P7 122 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 Q8NA96 180 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ZFPM2Q8WW38 1151 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 ALG3Q92685 438 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 RNF125Q96EQ8 232 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 HRASLS5Q96KN8 279 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 TRAPPC9Q96Q05 1148 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SOX7Q9BT81 388 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 KCNH6Q9H252 994 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SMOC2Q9H3U7 446 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SMURF2Q9HAU4 748 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 TMEM8AQ9HCN3 771 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 TMEM59LQ9UK28 342 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 CEP350Q5VT06 3117 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SRCAPQ6ZRS2 3230 aa2.82□□□□□ -1.96
MCF2-204ENST00000414978 SCN9AQ15858 1988 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 A0A1W2PQ45 241 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 A0A1W2PQY0 241 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TGFB1I1O43294 461 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 HNRNPCL1O60812 293 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 SOCS5O75159 536 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 APOA4P06727 396 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PDHA1P08559 390 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 IL1R1P14778 569 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 GCH1P30793 250 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 CIITAP33076 1130 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PGM1P36871 562 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PAFAH1B1P43034 410 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 FNTBP49356 437 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 DRG2P55039 364 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 ERV3-1Q14264 604 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 WSCD2Q2TBF2 565 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 SLC44A4Q53GD3 710 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 UTP14CQ5TAP6 766 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 ZNF787Q6DD87 383 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 GRAMD4Q6IC98 578 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 Q6ZS46 218 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 RIOX2Q8IUF8 465 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 EGFL6Q8IUX8 553 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 CHCHD4Q8N4Q1 142 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 LINS1Q8NG48 757 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 HMGB4Q8WW32 186 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 SNX27Q96L92 541 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TIGD1Q96MW7 591 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TWNKQ96RR1 684 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 G6PC3Q9BUM1 346 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TXLNGYQ9BZA5 131 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TMEM140Q9NV12 185 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms