RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TULP2O00295 520 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 CLASP2O75122 1294 aaKnown RBP10.44□□□□□ -0.74
DDB1-202ENST00000414411 RTN2O75298 545 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 CSPG5O95196 566 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 LSM8O95777 96 aaKnown RBP10.44□□□□□ -0.74
DDB1-202ENST00000414411 FGGP02679 453 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 FTLP02792 175 aaPredicted RBP10.44□□□□□ -0.74
DDB1-202ENST00000414411 HAPLN1P10915 354 aaPredicted RBP10.44□□□□□ -0.74
DDB1-202ENST00000414411 GZMAP12544 262 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 NPR3P17342 541 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 KLRC2P26717 231 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 RPL34P49207 117 aaKnown RBP10.44□□□□□ -0.74
DDB1-202ENST00000414411 BCAT1P54687 386 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 DUSP4Q13115 394 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 VSTM1Q6UX27 236 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 TRIM72Q6ZMU5 477 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 ADGRD2Q7Z7M1 963 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 STK32AQ8WU08 396 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 SLC22A17Q8WUG5 538 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 MED10Q9BTT4 135 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 PRDM12Q9H4Q4 367 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 ABI2Q9NYB9 513 aaPredicted RBP10.44□□□□□ -0.74
DDB1-202ENST00000414411 HESX1Q9UBX0 185 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 SLC27A5Q9Y2P5 690 aa10.44□□□□□ -0.74
DDB1-202ENST00000414411 PRUNE2Q8WUY3 3088 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 FAM170AA1A519 330 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 HHLA1C9JL84 531 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 M0QYV0 167 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 SHOX2O60902 331 aaPredicted RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 AP1G2O75843 785 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 GABBR2O75899 941 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 FAM200BP0CF97 657 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 CA8P35219 290 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 HSPA9P38646 679 aaKnown RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 NOMO3P69849 1222 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 GPC5P78333 572 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 CENPCQ03188 943 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 BST2Q10589 180 aaKnown RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 KCNC3Q14003 757 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 CLEC16AQ2KHT3 1053 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 CFAP58Q5T655 872 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 PMF1Q6P1K2 205 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 PASD1Q8IV76 773 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 TMEM35BQ8NCS4 154 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 KRT82Q9NSB4 513 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 CTTNBP2NLQ9P2B4 639 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 AMACRQ9UHK6 382 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 FBXW11Q9UKB1 542 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 BRWD1Q9NSI6 2320 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 GREB1Q4ZG55 1949 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 MIF4GDA9UHW6 222 aaKnown RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 F8VP50 259 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 TNFRSF10BO14763 440 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 XPO1O14980 1071 aaKnown RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 PER2O15055 1255 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 MTA2O94776 668 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 GLUD1P00367 558 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 SPATA31D3P0C874 917 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 SETSIPP0DME0 302 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 TUFMP49411 452 aaKnown RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 MAP3K7CLP57077 242 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 ADGRE1Q14246 886 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
DDB1-202ENST00000414411 DUSP6Q16828 381 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 TTMPQ5BVD1 217 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 SPATA31D4Q6ZUB0 917 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 MAATS1Q7Z4T9 603 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 TMEM110Q86TL2 294 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 CCDC26Q8TAB7 109 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 CPA5Q8WXQ8 436 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 SEC14L1Q92503 715 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 ALG3Q92685 438 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 ARL8AQ96BM9 186 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 C8orf48Q96LL4 319 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 NAP1L3Q99457 506 aaPredicted RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 SLC4A5Q9BY07 1137 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 TLE6Q9H808 572 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 PNPLA8Q9NP80 782 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 DMAP1Q9NPF5 467 aaPredicted RBP10.43□□□□□ -0.74
DDB1-202ENST00000414411 ALG6Q9Y672 507 aa10.43□□□□□ -0.74
DDB1-202ENST00000414411 TPD52L2O43399 206 aaKnown RBP10.42□□□□□ -0.74
DDB1-202ENST00000414411 KRT14P02533 472 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 IVLP07476 585 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 MMP8P22894 467 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 GRIK1P39086 918 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 PTP4A2Q12974 167 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 CLUL1Q15846 466 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 DDR2Q16832 855 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 RAB41Q5JT25 222 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
DDB1-202ENST00000414411 ZNF697Q5TEC3 545 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 NAA35Q5VZE5 725 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 ACAD10Q6JQN1 1059 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 RTL10Q7L3V2 364 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 RBM23Q86U06 439 aaKnown RBP10.42□□□□□ -0.74
DDB1-202ENST00000414411 PIGZQ86VD9 579 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 PHF13Q86YI8 300 aaPredicted RBP10.42□□□□□ -0.74
DDB1-202ENST00000414411 KREMEN2Q8NCW0 462 aa10.42□□□□□ -0.74
DDB1-202ENST00000414411 C1orf131Q8NDD1 294 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms