RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PRR5-ARHGAP8B1AHC4 643 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 H7C0C1 242 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 OGTO15294 1046 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 AVILO75366 819 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 CD19P15391 556 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 ATP5OP48047 213 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 EFNA5P52803 228 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 NRLP54845 237 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 ARHGAP8P85298 464 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 CAPSQ13938 189 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 HIC1Q14526 733 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 TAF5Q15542 800 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 NPNTQ6UXI9 565 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 C4orf22Q6V702 233 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 TIFABQ6ZNK6 161 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 FAM172AQ8WUF8 416 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 RILPQ96NA2 401 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 TUBGCP5Q96RT8 1024 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 TTC1Q99614 292 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 KLC2Q9H0B6 622 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 PLAC1Q9HBJ0 212 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 S100A14Q9HCY8 104 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 PPM1HQ9ULR3 514 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 BAG2O95816 211 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 ERBB2P04626 1255 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 GSTT1P30711 240 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 ALDH18A1P54886 795 aaKnown RBP18.29■□□□□ 0.52
SDCBP-202ENST00000413219 RPL26P61254 145 aaKnown RBP18.29■□□□□ 0.52
SDCBP-202ENST00000413219 SLC5A9Q2M3M2 681 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 MDH1BQ5I0G3 518 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 SCARA5Q6ZMJ2 495 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 ILDR2Q71H61 639 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 CAND1Q86VP6 1230 aaKnown RBP18.29■□□□□ 0.52
SDCBP-202ENST00000413219 ATG4CQ96DT6 458 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 DTNBP1Q96EV8 351 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 SPATA16Q9BXB7 569 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 MRPL4Q9BYD3 311 aaKnown RBP18.29■□□□□ 0.52
SDCBP-202ENST00000413219 SLC13A1Q9BZW2 595 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 VCX3AQ9NNX9 186 aa18.29■□□□□ 0.52
SDCBP-202ENST00000413219 CCDC195A0A1B0GUA6 201 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 FAM159BA6NKW6 160 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 CCNT2O60583 730 aaKnown RBP18.28■□□□□ 0.52
SDCBP-202ENST00000413219 KLHL2O95198 593 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
SDCBP-202ENST00000413219 CNTFP26441 200 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 OAZ1P54368 228 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 CDH6P55285 790 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 SH3BGRP55822 239 aaPredicted RBP18.28■□□□□ 0.52
SDCBP-202ENST00000413219 DGKZQ13574 1117 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 LIN52Q52LA3 116 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 EFHC1Q5JVL4 640 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 DHDDSQ86SQ9 333 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 EGFL6Q8IUX8 553 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 WDR75Q8IWA0 830 aaKnown RBP18.28■□□□□ 0.52
SDCBP-202ENST00000413219 ST13P4Q8IZP2 240 aaPredicted RBP18.28■□□□□ 0.52
SDCBP-202ENST00000413219 STKLD1Q8NE28 680 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 JADE3Q92613 823 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 RNF157Q96PX1 679 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 SMYD2Q9NRG4 433 aa18.28■□□□□ 0.52
SDCBP-202ENST00000413219 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
SDCBP-202ENST00000413219 CYB561D2O14569 222 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 RAD17O75943 681 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 ZCCHC18P0CG32 403 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 ZNF143P52747 638 aaPredicted RBP18.27■□□□□ 0.52
SDCBP-202ENST00000413219 MMRN1Q13201 1228 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 CNPY1Q3B7I2 92 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 RASIP1Q5U651 963 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 PDSS2Q86YH6 399 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 NDUFAF2Q8N183 169 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 OR6Y1Q8NGX8 325 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 PEBP4Q96S96 227 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 CNPY3Q9BT09 278 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 MAF1Q9H063 256 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 FAM96AQ9H5X1 160 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 XAB2Q9HCS7 855 aaKnown RBP18.27■□□□□ 0.52
SDCBP-202ENST00000413219 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
SDCBP-202ENST00000413219 BCLAF3A2AJT9 711 aaKnown RBP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 SLC15A5A6NIM6 579 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 MSCO60682 206 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 CSH1P0DML2 217 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 CSH2P0DML3 217 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 KITP10721 976 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 TGM2P21980 687 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 CHRNA5P30532 468 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 MAGEA3P43357 314 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 MARK2Q7KZI7 788 aaKnown RBP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 REPS2Q8NFH8 660 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 GSDMBQ8TAX9 411 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 ZBED3Q96IU2 234 aaPredicted RBP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 DDX50Q9BQ39 737 aaKnown RBP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 TCHPQ9BT92 498 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 BCO2Q9BYV7 579 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 C20orf27Q9GZN8 174 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 ZNF395Q9H8N7 513 aaPredicted RBP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 PCMTD2Q9NV79 361 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 ETNK2Q9NVF9 386 aa18.27■□□□□ 0.51
SDCBP-202ENST00000413219 MARCOQ9UEW3 520 aaPredicted RBP18.27■□□□□ 0.51
SDCBP-202ENST00000413219 ITGA11Q9UKX5 1188 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms