RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 ZNF806P0C7X5 589 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 NR2F2P24468 414 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 RAP1GAPP47736 663 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 USP46P62068 366 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
LINC00388-201ENST00000412714 SF3A2Q15428 464 aaKnown RBP13.42□□□□□ -0.26
LINC00388-201ENST00000412714 SYCP1Q15431 976 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 ELF2Q15723 593 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 CCDC6Q16204 474 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 CCDC40Q4G0X9 1142 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 TDRD10Q5VZ19 366 aaKnown RBP13.42□□□□□ -0.26
LINC00388-201ENST00000412714 TMEM174Q8WUU8 243 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 C8orf48Q96LL4 319 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 SLITRK1Q96PX8 696 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 ELOVL4Q9GZR5 314 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 LINC00597Q9H2U6 94 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 POLR3BQ9NW08 1133 aaPredicted RBP13.42□□□□□ -0.26
LINC00388-201ENST00000412714 CGNQ9P2M7 1197 aaKnown RBP13.42□□□□□ -0.26
LINC00388-201ENST00000412714 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 SIK3Q9Y2K2 1263 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 MYO16Q9Y6X6 1858 aa13.42□□□□□ -0.26
LINC00388-201ENST00000412714 CNOT1A5YKK6 2376 aaKnown RBP13.42□□□□□ -0.26
LINC00388-201ENST00000412714 ACACBO00763 2458 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 ATP8B3O60423 1300 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 ZNF840PA6NDX5 716 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 GOLGA6L9A6NEM1 432 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 A8MXQ7 604 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 PES1O00541 588 aaKnown RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 SLC9A3R1O14745 358 aaPredicted RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 NR3C1P04150 777 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 PTPN1P18031 435 aaKnown RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 RPL13P26373 211 aaKnown RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 ATICP31939 592 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 DGKEP52429 567 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 LIMK1P53667 647 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 SLC7A9P82251 487 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 IFRD2Q12894 506 aaPredicted RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 PLK5Q496M5 336 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 CREBRFQ8IUR6 639 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 B3GALNT2Q8NCR0 500 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 TSTD1Q8NFU3 115 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 EZH1Q92800 747 aaPredicted RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 EEF2KMTQ96G04 330 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 ZC3H10Q96K80 434 aaKnown RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 NXF1Q9UBU9 619 aaKnown RBP13.41□□□□□ -0.26
LINC00388-201ENST00000412714 EBF1Q9UH73 591 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 CPQQ9Y646 472 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 CACNA1BQ00975 2339 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 KIAA1549LQ6ZVL6 1849 aa13.41□□□□□ -0.26
LINC00388-201ENST00000412714 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 EXOC3O60645 756 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 STAU1O95793 577 aaKnown RBP13.4□□□□□ -0.26
LINC00388-201ENST00000412714 TUBB4AP04350 444 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 TRIM21P19474 475 aaKnown RBP13.4□□□□□ -0.26
LINC00388-201ENST00000412714 GBP1P32455 592 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 MPLP40238 635 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 SEC13P55735 322 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 MYL6P60660 151 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 TAF10Q12962 218 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 ADAM9Q13443 819 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 BIRC3Q13489 604 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 MEA1Q16626 185 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 DDX42Q86XP3 938 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC00388-201ENST00000412714 TMTC1Q8IUR5 882 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 SLC9A9Q8IVB4 645 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 C16orf45Q96MC5 204 aaPredicted RBP13.4□□□□□ -0.26
LINC00388-201ENST00000412714 EDEM3Q9BZQ6 932 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 ZNF518BQ9C0D4 1074 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 DUSP15Q9H1R2 295 aaPredicted RBP13.4□□□□□ -0.26
LINC00388-201ENST00000412714 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 METTL14Q9HCE5 456 aaKnown RBP13.4□□□□□ -0.26
LINC00388-201ENST00000412714 VPS45Q9NRW7 570 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 SMPD4Q9NXE4 827 aa13.4□□□□□ -0.26
LINC00388-201ENST00000412714 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
LINC00388-201ENST00000412714 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
LINC00388-201ENST00000412714 OLFM2O95897 454 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 OAS1P00973 400 aaKnown RBP13.39□□□□□ -0.27
LINC00388-201ENST00000412714 CYP17A1P05093 508 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 EPB41P11171 864 aaKnown RBP13.39□□□□□ -0.27
LINC00388-201ENST00000412714 MBL2P11226 248 aaPredicted RBP13.39□□□□□ -0.27
LINC00388-201ENST00000412714 YWHAQP27348 245 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 KRT9P35527 623 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 OPRD1P41143 372 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 AP3M2P53677 418 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 ZBED6P86452 979 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 ZXDBP98169 803 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 ZNF699Q32M78 642 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 DNTTIP2Q5QJE6 756 aaKnown RBP13.39□□□□□ -0.27
LINC00388-201ENST00000412714 PLA2G2CQ5R387 149 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 C11orf74Q86VG3 221 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 NUP93Q8N1F7 819 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 PDZD8Q8NEN9 1154 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 USP33Q8TEY7 942 aa13.39□□□□□ -0.27
LINC00388-201ENST00000412714 ZNF516Q92618 1163 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms