RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 KANSL3Q9P2N6 904 aa10.15□□□□□ -0.79
SMPD4-203ENST00000412570 RASAL2Q9UJF2 1139 aa10.15□□□□□ -0.79
SMPD4-203ENST00000412570 CDH9Q9ULB4 789 aa10.15□□□□□ -0.79
SMPD4-203ENST00000412570 WDR27A2RRH5 827 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 CA3P07451 260 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 RPAINQ86UA6 219 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 SLC13A5Q86YT5 568 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 CRYBG2Q8N1P7 616 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 OR2W6PQ8NHA6 318 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 SLC22A17Q8WUG5 538 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 VN1R3Q9BXE9 311 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 CCSER2Q9H7U1 834 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 DMAP1Q9NPF5 467 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 GKN1Q9NS71 199 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 ASNSD1Q9NWL6 643 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 MPP6Q9NZW5 540 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 BCCIPQ9P287 314 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 DNPEPQ9ULA0 475 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 FAM72CH0Y354 149 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 TSPAN3O60637 253 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 BANF1O75531 89 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 RFPL2O75678 378 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 DGKIO75912 1065 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 ENDOD1O94919 500 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 ADCY8P40145 1251 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 MRPS5P82675 430 aaKnown RBP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 DR1Q01658 176 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 ROR1Q01973 937 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 PPP2R5DQ14738 602 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 FAM72AQ5TYM5 149 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 FAM72DQ6L9T8 149 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 FAM72BQ86X60 149 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 CFAP52Q8N1V2 620 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 C12orf76Q8N812 135 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 TOP1MTQ969P6 601 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 RABEP2Q9H5N1 569 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 VRTNQ9H8Y1 702 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 PLK2Q9NYY3 685 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 STIM2Q9P246 746 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 INTUQ9ULD6 942 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 KNL1Q8NG31 2342 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 HIDE1A8MVS5 230 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 BNIP3LO60238 219 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 LTFP02788 710 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 MYBL1P10243 752 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 PEX5P50542 639 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 HDAC4P56524 1084 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 DSC1Q08554 894 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 CBX2Q14781 532 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 FIBCD1Q8N539 461 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 PRELID2Q8N945 189 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 PPM1EQ8WY54 764 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 IGSF21Q96ID5 467 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 HNRNPABQ99729 332 aaKnown RBP10.14□□□□□ -0.79
SMPD4-203ENST00000412570 ANLNQ9NQW6 1124 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 PCDHA3Q9Y5H8 950 aa10.14□□□□□ -0.79
SMPD4-203ENST00000412570 TLDC2A0PJX2 215 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 GABRDO14764 452 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 CXCL14O95715 111 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 URODP06132 367 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 IRS1P35568 1242 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 FAM71DQ8N9W8 422 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 ACTL9Q8TC94 416 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 UBP1Q9NZI7 540 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 PCDHB5Q9Y5E4 795 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 MYO18AQ92614 2054 aaKnown RBP10.13□□□□□ -0.79
SMPD4-203ENST00000412570 A0A0A6YYK5 440 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-203ENST00000412570 C2CD4BA6NLJ0 364 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 FGF18O76093 207 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 SEC24AO95486 1093 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 KLRC2P26717 231 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 OTUD4Q01804 1114 aaKnown RBP10.13□□□□□ -0.79
SMPD4-203ENST00000412570 UBAP2Q5T6F2 1119 aaKnown RBP10.13□□□□□ -0.79
SMPD4-203ENST00000412570 SPOCD1Q6ZMY3 1216 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 ING5Q8WYH8 240 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 TCF25Q9BQ70 676 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 TKTL2Q9H0I9 626 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 LHX5Q9H2C1 402 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 OSER1Q9NX31 292 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 KCNK1O00180 336 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 CCL16O15467 120 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 MYL4P12829 197 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 FAM189BP81408 668 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 GBE1Q04446 702 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 ZNF268Q14587 947 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-203ENST00000412570 DARS2Q6PI48 645 aaKnown RBP10.13□□□□□ -0.79
SMPD4-203ENST00000412570 TMEM86AQ8N2M4 240 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 UBLCP1Q8WVY7 318 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-203ENST00000412570 CASKIN2Q8WXE0 1202 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 AGAP3Q96P47 875 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 ACBD6Q9BR61 282 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 ATP8A1Q9Y2Q0 1164 aa10.13□□□□□ -0.79
SMPD4-203ENST00000412570 TTC24A2A3L6 582 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-203ENST00000412570 XPO1O14980 1071 aaKnown RBP10.12□□□□□ -0.79
SMPD4-203ENST00000412570 TRUB2O95900 331 aaKnown RBP10.12□□□□□ -0.79
SMPD4-203ENST00000412570 WEE1P30291 646 aa10.12□□□□□ -0.79
SMPD4-203ENST00000412570 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms