RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
LINC00963-201ENST00000412141 NDRG1Q92597 394 aaKnown RBP12.22□□□□□ -0.45
LINC00963-201ENST00000412141 ACDQ96AP0 544 aa12.22□□□□□ -0.45
LINC00963-201ENST00000412141 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
LINC00963-201ENST00000412141 KLF16Q9BXK1 252 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-201ENST00000412141 TPSD1Q9BZJ3 242 aa12.22□□□□□ -0.45
LINC00963-201ENST00000412141 CTNND2Q9UQB3 1225 aa12.22□□□□□ -0.45
LINC00963-201ENST00000412141 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 TULP2O00295 520 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 APBB3O95704 486 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 CALCAP01258 141 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 GBP1P32455 592 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 WASP42768 502 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 TUBP50607 506 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 GAD2Q05329 585 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 EFEMP1Q12805 493 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 CAMK4Q16566 473 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 GOLGA7BQ2TAP0 167 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 COBLL1Q53SF7 1204 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 SYT13Q7L8C5 426 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 DGLUCYQ7Z3D6 616 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 ZC3H3Q8IXZ2 948 aaKnown RBP12.21□□□□□ -0.45
LINC00963-201ENST00000412141 CAMKK1Q8N5S9 505 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 TXNDC5Q8NBS9 432 aaKnown RBP12.21□□□□□ -0.45
LINC00963-201ENST00000412141 UBA3Q8TBC4 463 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 SLC35C1Q96A29 364 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
LINC00963-201ENST00000412141 ARRDC1-AS1Q9H2J1 176 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 SMOC1Q9H4F8 434 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 SPHK2Q9NRA0 654 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00963-201ENST00000412141 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 RASAL2Q9UJF2 1139 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 DNMT3LQ9UJW3 386 aa12.21□□□□□ -0.45
LINC00963-201ENST00000412141 LSM7Q9UK45 103 aaKnown RBP12.21□□□□□ -0.45
LINC00963-201ENST00000412141 DCDC2BA2VCK2 349 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 NEDD8-MDP1E9PL57 170 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 GDF9O60383 454 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 TULP3O75386 442 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 KCNA4P22459 653 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 GRIA2P42262 883 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 FMO5P49326 533 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 PDE4CQ08493 712 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 GOLGA8FQ08AF8 430 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 GOLGA8DPQ0D2H9 430 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 PUM1Q14671 1186 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00963-201ENST00000412141 SF3A2Q15428 464 aaKnown RBP12.2□□□□□ -0.46
LINC00963-201ENST00000412141 TTI2Q6NXR4 508 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 RSRC2Q7L4I2 434 aaKnown RBP12.2□□□□□ -0.46
LINC00963-201ENST00000412141 CACNA2D4Q7Z3S7 1137 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 TTC39CQ8N584 583 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 GPR161Q8N6U8 529 aaKnown RBP12.2□□□□□ -0.46
LINC00963-201ENST00000412141 KAT5Q92993 513 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 BBS2Q9BXC9 721 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 GTPBP4Q9BZE4 634 aaKnown RBP12.2□□□□□ -0.46
LINC00963-201ENST00000412141 CYLDQ9NQC7 956 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 DNAJC17Q9NVM6 304 aaKnown RBP12.2□□□□□ -0.46
LINC00963-201ENST00000412141 PLK2Q9NYY3 685 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 DEC1Q9P2X7 70 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 CDV3Q9UKY7 258 aaKnown RBP12.2□□□□□ -0.46
LINC00963-201ENST00000412141 COQ4Q9Y3A0 265 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 GON4LQ3T8J9 2241 aa12.2□□□□□ -0.46
LINC00963-201ENST00000412141 CNOT1A5YKK6 2376 aaKnown RBP12.19□□□□□ -0.46
LINC00963-201ENST00000412141 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.19□□□□□ -0.46
LINC00963-201ENST00000412141 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.19□□□□□ -0.46
LINC00963-201ENST00000412141 SGK1O00141 431 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 PIK3R2O00459 728 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 RALAP11233 206 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 HNRNPLP14866 589 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00963-201ENST00000412141 PLA2G4AP47712 749 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 TKTL1P51854 596 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 SLC8A3P57103 927 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 MCCD1P59942 119 aaPredicted RBP12.19□□□□□ -0.46
LINC00963-201ENST00000412141 LMNB2Q03252 620 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 MORC3Q14149 939 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 C10orf76Q5T2E6 689 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 ARHGAP17Q68EM7 881 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 TMEM270Q6UE05 265 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 HTR3DQ70Z44 454 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 CCDC186Q7Z3E2 898 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 PGBD3Q8N328 593 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 PPM1KQ8N3J5 372 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 IL17RCQ8NAC3 791 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 ANKRD52Q8NB46 1076 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 CCDC26Q8TAB7 109 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 HMGB4Q8WW32 186 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 OTUB2Q96DC9 234 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 CEP63Q96MT8 703 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 ULBP1Q9BZM6 244 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 LRRC4Q9HBW1 653 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 METTL14Q9HCE5 456 aaKnown RBP12.19□□□□□ -0.46
LINC00963-201ENST00000412141 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
LINC00963-201ENST00000412141 BCCIPQ9P287 314 aaKnown RBP eCLIP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms