RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CHRNB4P30926 498 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 NUDT2P50583 147 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 RAD23AP54725 363 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 MRPS10P82664 201 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PLOD1Q02809 727 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FAM83EQ2M2I3 478 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TRMT5Q32P41 509 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 OGFRL1Q5TC84 451 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 USPL1Q5W0Q7 1092 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ADCK2Q7Z695 626 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TNS4Q8IZW8 715 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DHRSXQ8N5I4 330 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ANKRD13CQ8N6S4 541 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TSPYL6Q8N831 410 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ANKFN1Q8N957 763 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF709Q8N972 641 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FANCBQ8NB91 859 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TERB2Q8NHR7 220 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 APPBP2Q92624 585 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DCUN1D5Q9BTE7 237 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 HPS4Q9NQG7 708 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FBXO40Q9UH90 709 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 KCNS2Q9ULS6 477 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TPRKBQ9Y3C4 175 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 WDR17Q8IZU2 1322 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 A0A0A6YYJ9 748 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SLCO1B7G3V0H7 640 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PI4K2BG5E9Z4 385 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TSPAN4O14817 238 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 NR3C2P08235 984 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ANXA5P08758 320 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PDGFRAP16234 1089 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SERPINB9P50453 376 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ARFIP2P53365 341 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ELOAQ14241 798 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FASTKD3Q14CZ7 662 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ARHGAP12Q8IWW6 846 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 CMTR1Q8N1G2 835 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 OR52K2Q8NGK3 314 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 LRRC20Q8TCA0 184 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PI4K2BQ8TCG2 481 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 CYP4F12Q9HCS2 524 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TM9SF3Q9HD45 589 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 COMMD8Q9NX08 183 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SLC39A1Q9NY26 324 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TMEM63CQ9P1W3 806 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PLEKHM1Q9Y4G2 1056 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PHF20L1A8MW92 1017 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 AHCYL1O43865 530 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 ATE1O95260 518 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 ASMTLO95671 621 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 CDH13P55290 713 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 NPEPPSP55786 919 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 PRAMEP78395 509 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 BTG3Q14201 252 aaPredicted RBP4.71□□□□□ -1.65
PTPN13-202ENST00000411767 PLEKHG6Q3KR16 790 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 CACHD1Q5VU97 1274 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 AGAP7PQ5VUJ5 663 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 AGAP6Q5VW22 663 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 SMYD5Q6GMV2 418 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 TRNP1Q6NT89 227 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 SLC13A5Q86YT5 568 aaPredicted RBP4.71□□□□□ -1.65
PTPN13-202ENST00000411767 L3MBTL4Q8NA19 623 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 GOLM1Q8NBJ4 401 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 SNAPC3Q92966 411 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 AKT1S1Q96B36 256 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 SMARCD1Q96GM5 515 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 AGAP4Q96P64 663 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 C6orf62Q9GZU0 229 aaPredicted RBP4.71□□□□□ -1.65
PTPN13-202ENST00000411767 BRD9Q9H8M2 597 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 SENP2Q9HC62 589 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 KIAA1586Q9HCI6 787 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 ABCB10Q9NRK6 738 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 VPS9D1Q9Y2B5 631 aa4.71□□□□□ -1.65
PTPN13-202ENST00000411767 TIMM8BQ9Y5J9 83 aaPredicted RBP4.71□□□□□ -1.65
PTPN13-202ENST00000411767 RPAP1Q9BWH6 1393 aaPredicted RBP4.71□□□□□ -1.65
PTPN13-202ENST00000411767 A0A075B6Q4 140 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SH3PXD2BA1X283 911 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PLD2O14939 933 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 SNAP91O60641 907 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PNPP00491 289 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ITGB3P05106 788 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PRG2P13727 222 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ALOX12P18054 663 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 HK1P19367 917 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 GPD2P43304 727 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PHKA2P46019 1235 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PTPN5P54829 565 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ECT2LQ008S8 904 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ELF2Q15723 593 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 LONP2Q86WA8 852 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ATCAYQ86WG3 371 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 MRPL41Q8IXM3 137 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 JADE3Q92613 823 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 PHF21BQ96EK2 531 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 DCLK3Q9C098 648 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ZC3H12CQ9C0D7 883 aaKnown RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 CLPBQ9H078 707 aa4.71□□□□□ -1.66
PTPN13-202ENST00000411767 ELL3Q9HB65 397 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-202ENST00000411767 AP1M2Q9Y6Q5 423 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms