RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 AKAP5P24588 427 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 HOXA7P31268 230 aaPredicted RBP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 GATMP50440 423 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 SUMO3P55854 103 aaPredicted RBP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 KRTAP10-5P60370 271 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 TIAL1Q01085 375 aaKnown RBP eCLIP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 CFHR3Q02985 330 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 SLC13A2Q13183 592 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 GAB1Q13480 694 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZNF750Q32MQ0 723 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 SLC9C1Q4G0N8 1177 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 C3orf38Q5JPI3 329 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 CERCAMQ5T4B2 595 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 CACHD1Q5VU97 1274 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 LMBRD2Q68DH5 695 aaPredicted RBP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 TPH2Q8IWU9 490 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 SPARTQ8N0X7 666 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 C12orf76Q8N812 135 aaPredicted RBP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 IL31RAQ8NI17 732 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 HOOK2Q96ED9 719 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 THOC3Q96J01 351 aaKnown RBP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 HS6ST2Q96MM7 605 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 SLITRK1Q96PX8 696 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 MAP3K14Q99558 947 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 VN1R3Q9BXE9 311 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 SAP30LQ9HAJ7 183 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 VPS45Q9NRW7 570 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 PIH1D1Q9NWS0 290 aaKnown RBP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 GAR1Q9NY12 217 aaKnown RBP1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 MSRB1Q9NZV6 116 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 PI4KBQ9UBF8 816 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 RIMKLBQ9ULI2 386 aa1.87□□□□□ -2.11
RNU2-55P-201ENST00000411146 NOTCH3Q9UM47 2321 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 ERVV-2B6SEH9 535 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 TBC1D4O60343 1298 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 DTNBO60941 627 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 TULP3O75386 442 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 PLAUP00749 431 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 PARP1P09874 1014 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 KRTAP5-9P26371 169 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 PRKAR1BP31321 381 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 GALNSP34059 522 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 PTDSS1P48651 473 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 AGFG1P52594 562 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 SUMO2P61956 95 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 RPS13P62277 151 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 PPATQ06203 517 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 STK3Q13188 491 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 PRTGQ2VWP7 1150 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 MANEAQ5SRI9 462 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 CC2D1BQ5T0F9 858 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 IFIT1BQ5T764 474 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 DAB2IPQ5VWQ8 1189 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 TTLL5Q6EMB2 1281 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 NPNTQ6UXI9 565 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 CLEC9AQ6UXN8 241 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZNF783Q6ZMS7 281 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZNF793Q6ZN11 406 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 C18orf65Q6ZTR6 163 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 OVCH2Q7RTZ1 564 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 NPM2Q86SE8 214 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 CHPFQ8IZ52 775 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 KBTBD7Q8WVZ9 684 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 OIT3Q8WWZ8 545 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 NEUROG1Q92886 237 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 C1GALT1C1Q96EU7 318 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 STK31Q9BXU1 1019 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 RHOBTB2Q9BYZ6 727 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 MYLK2Q9H1R3 596 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 MRPL44Q9H9J2 332 aaKnown RBP1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 TMEM8AQ9HCN3 771 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 XPNPEP3Q9NQH7 507 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 TMEM45AQ9NWC5 275 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 SEMA5BQ9P283 1151 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZNF112Q9UJU3 913 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 FZD4Q9ULV1 537 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 VPS4AQ9UN37 437 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 ICKQ9UPZ9 632 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 SLC27A6Q9Y2P4 619 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 SCN5AQ14524 2016 aa1.86□□□□□ -2.11
RNU2-55P-201ENST00000411146 TRBV5-3A0A0A0MS03 114 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 A0A1W2PPL8 197 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 A6NNC1 897 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 A6NNZ2 444 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 ALG1L2C9J202 215 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 PYCARD-AS1I3L0S3 204 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 RAB27BO00194 218 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 INPPL1O15357 1258 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 UGDHO60701 494 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 RNF8O76064 485 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 IL1R1P14778 569 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 ST6GAL1P15907 406 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 EPHA3P29320 983 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 SLC7A1P30825 629 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 PDLIM4P50479 330 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 PGDP52209 483 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 P2RX3P56373 397 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZXDBP98169 803 aa1.85□□□□□ -2.11
RNU2-55P-201ENST00000411146 B4GALNT1Q00973 533 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms