RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 EURLQ9NYK6 297 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 RRN3Q9NYV6 651 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 STAP1Q9ULZ2 295 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 SQORQ9Y6N5 450 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 SMIM23A6NLE4 172 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 HACD1B0YJ81 288 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 TULP2O00295 520 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 SEPT4O43236 478 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 ZNF623O75123 536 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 GSTA2P09210 222 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 RARBP10826 455 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 RPL22P35268 128 aaKnown RBP14.13□□□□□ -0.15
LIMS1-205ENST00000410093 MATKP42679 507 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 MAGEA6P43360 314 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 RGS7P49802 495 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 BCAR1P56945 870 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 DYNLT1P63172 113 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 SKIDA1Q1XH10 827 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 UBE2Q1Q7Z7E8 422 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 MRPL10Q7Z7H8 261 aaKnown RBP14.13□□□□□ -0.15
LIMS1-205ENST00000410093 SERINC5Q86VE9 423 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 TAX1BP1Q86VP1 789 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 CACNA2D3Q8IZS8 1091 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 PLD5Q8N7P1 536 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 PYROXD1Q8WU10 500 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 CPT1BQ92523 772 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 ACSF2Q96CM8 615 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-205ENST00000410093 LRRC39Q96DD0 335 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 SLC9A7Q96T83 725 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 FAM105AQ9NUU6 356 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 NKIRAS1Q9NYS0 192 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 ZMYND8Q9ULU4 1186 aaPredicted RBP14.13□□□□□ -0.15
LIMS1-205ENST00000410093 SMG5Q9UPR3 1016 aaKnown RBP14.13□□□□□ -0.15
LIMS1-205ENST00000410093 NAALADL1Q9UQQ1 740 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 CDY2AQ9Y6F7 541 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 FAM169AQ9Y6X4 670 aa14.13□□□□□ -0.15
LIMS1-205ENST00000410093 SF3B1O75533 1304 aaKnown RBP eCLIP14.13□□□□□ -0.155e-6■■■■■ 117.3
LIMS1-205ENST00000410093 CYB561D2O14569 222 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 DAB1O75553 588 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 THP07101 528 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 CD48P09326 243 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 NPR3P17342 541 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 PTPN1P18031 435 aaKnown RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 NOS2P35228 1153 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 SLCO1A2P46721 670 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 SEC24CP53992 1094 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 HDAC4P56524 1084 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 PDIA2Q13087 525 aaKnown RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 C15orf59Q2T9L4 293 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 SLC25A52Q3SY17 297 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 TRNP1Q6NT89 227 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 SCYL2Q6P3W7 929 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 FOXR1Q6PIV2 292 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 GLIS1Q8NBF1 620 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 C9orf72Q96LT7 481 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 ZNF317Q96PQ6 595 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 SNRNP25Q9BV90 132 aaKnown RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 TRIM62Q9BVG3 475 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 SENP6Q9GZR1 1112 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 KLC2Q9H0B6 622 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 TSPYL2Q9H2G4 693 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 C11orf49Q9H6J7 331 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 DDX20Q9UHI6 824 aaKnown RBP14.12□□□□□ -0.15
LIMS1-205ENST00000410093 ST3GAL5Q9UNP4 418 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 NME7Q9Y5B8 376 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 RAD54BQ9Y620 910 aa14.12□□□□□ -0.15
LIMS1-205ENST00000410093 H7C0C1 242 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 MYO1CO00159 1063 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 PTGESO14684 152 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 SPTLC1O15269 473 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 PRPF4O43172 522 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIMS1-205ENST00000410093 ZSCAN5DPP0CG00 497 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 FGFR1P11362 822 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 IL4RP24394 825 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 CST5P28325 142 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-205ENST00000410093 MAGEA9P43362 315 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 ATP5OP48047 213 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 GEMIN4P57678 1058 aaKnown RBP14.11□□□□□ -0.15
LIMS1-205ENST00000410093 ZNF200P98182 395 aaPredicted RBP14.11□□□□□ -0.15
LIMS1-205ENST00000410093 ATP11AP98196 1134 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 ITIH4Q14624 930 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 CDO1Q16878 200 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 NBPF20Q3BBV1 942 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 CCDC38Q502W7 563 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 EFHC2Q5JST6 749 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 UNC45BQ8IWX7 931 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 CCDC13Q8IYE1 715 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 ZBED8Q8IZ13 594 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 MCUQ8NE86 351 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 UHMK1Q8TAS1 419 aaKnown RBP14.11□□□□□ -0.15
LIMS1-205ENST00000410093 DYDC1Q8WWB3 177 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 APBB2Q92870 758 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 NT5C3BQ969T7 300 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 ALKBH8Q96BT7 664 aaKnown RBP14.11□□□□□ -0.15
LIMS1-205ENST00000410093 PGBD4Q96DM1 585 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 UROC1Q96N76 676 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 DPEP3Q9H4B8 488 aa14.11□□□□□ -0.15
LIMS1-205ENST00000410093 LRRC4CQ9HCJ2 640 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms