RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 GOLGA1Q92805 767 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 CORO1BQ9BR76 489 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
PMS1-204ENST00000409823 PCSK1NQ9UHG2 260 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 SCML2Q9UQR0 700 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 LINC01565O15544 149 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 MTA2O94776 668 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
PMS1-204ENST00000409823 SDC4P31431 198 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 CXCR5P32302 372 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 LLGL1Q15334 1064 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 IFI16Q16666 785 aaKnown RBP13.16□□□□□ -0.3
PMS1-204ENST00000409823 TCEAL5Q5H9L2 206 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 BTBD8Q5XKL5 378 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 PDE12Q6L8Q7 609 aaKnown RBP13.16□□□□□ -0.3
PMS1-204ENST00000409823 TMC5Q6UXY8 1006 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 CCDC149Q6ZUS6 474 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 PEX26Q7Z412 305 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 ARFGAP1Q8N6T3 406 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 TTC16Q8NEE8 873 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 PSMG2Q969U7 264 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 CCSER2Q9H7U1 834 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.16□□□□□ -0.3
PMS1-204ENST00000409823 SFMBT1Q9UHJ3 866 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 DOCK6Q96HP0 2047 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 ATP1A1P05023 1023 aaKnown RBP13.16□□□□□ -0.3
PMS1-204ENST00000409823 MATKP42679 507 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 MARCKSL1P49006 195 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 ZNF143P52747 638 aaPredicted RBP13.16□□□□□ -0.3
PMS1-204ENST00000409823 SCYL2Q6P3W7 929 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 RSRC2Q7L4I2 434 aaKnown RBP13.16□□□□□ -0.3
PMS1-204ENST00000409823 MON1AQ86VX9 555 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 FAM172AQ8WUF8 416 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 TBCBQ99426 244 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 IP6K2Q9UHH9 426 aa13.16□□□□□ -0.3
PMS1-204ENST00000409823 MSI1O43347 362 aaKnown RBP13.15□□□□□ -0.3
PMS1-204ENST00000409823 PROSCO94903 275 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 CSH1P0DML2 217 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 CSH2P0DML3 217 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 SULT1E1P49888 294 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 ADGRE1Q14246 886 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 DUSP6Q16828 381 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 KCNT1Q5JUK3 1230 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 TXNRD3NBQ6F5E7 133 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 KRT35Q92764 455 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 IL37Q9NZH6 218 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 M0QYT0 321 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 LRCH4O75427 683 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 HADHBP55084 474 aaKnown RBP13.15□□□□□ -0.3
PMS1-204ENST00000409823 TAS2R40P59535 323 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 NTHL1P78549 312 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 TCEAL1Q15170 157 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 ATP13A4Q4VNC1 1196 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
PMS1-204ENST00000409823 NT5DC3Q86UY8 548 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 MIB1Q86YT6 1006 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 LMAN2LQ9H0V9 348 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 PLEKHA4Q9H4M7 779 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 TMPRSS4Q9NRS4 437 aa13.15□□□□□ -0.3
PMS1-204ENST00000409823 FAM92AA1XBS5 289 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 C2orf78A6NCI8 922 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 SART1O43290 800 aaKnown RBP13.15□□□□□ -0.31
PMS1-204ENST00000409823 SRGAP2O75044 1071 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 MYL4P12829 197 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 HYAL1Q12794 435 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 Q7L0L9 218 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 FAM131BQ86XD5 332 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.15□□□□□ -0.31
PMS1-204ENST00000409823 IRGQQ8WZA9 623 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 CNPY3Q9BT09 278 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 ZWILCHQ9H900 591 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.31
PMS1-204ENST00000409823 TLR8Q9NR97 1041 aaKnown RBP13.15□□□□□ -0.31
PMS1-204ENST00000409823 TRIOO75962 3097 aa13.15□□□□□ -0.31
PMS1-204ENST00000409823 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 A0A1W2PRU2 124 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 TADA3O75528 432 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 DAB1O75553 588 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 ZMYND10O75800 440 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 RARGP13631 454 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 GABRR2P28476 465 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 CASQ1P31415 396 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 NOS2P35228 1153 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 CYP4F8P98187 520 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 ZFYVE27Q5T4F4 411 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 STXBP5Q5T5C0 1151 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 PRPF38BQ5VTL8 546 aaKnown RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 OTUD1Q5VV17 481 aaPredicted RBP13.14□□□□□ -0.31
PMS1-204ENST00000409823 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 GAREM2Q75VX8 874 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 SLFN11Q7Z7L1 901 aa13.14□□□□□ -0.31
PMS1-204ENST00000409823 TMEM150AQ86TG1 271 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms