RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 PCDHA3Q9Y5H8 950 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 HCFC2Q9Y5Z7 792 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 LAMA4Q16363 1823 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 TNRC18O15417 2968 aaPredicted RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 SLC15A5A6NIM6 579 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 NT5C1B-RDH14C9J2C7 533 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 RFXAPO00287 272 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 NCAM2O15394 837 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 ORC4O43929 436 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 PRDM1O75626 825 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 TTLL1O95922 423 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 NDUFB10O96000 172 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 TSPY3P0CV98 308 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 TSPY8P0CW00 308 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 PCP11498 1178 aaKnown RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 PDIA3P30101 505 aaKnown RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 COPB2P35606 906 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 STAT5AP42229 794 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 ALDH9A1P49189 494 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 EPHB3P54753 998 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 ARL4CP56559 192 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 HTRA4P83105 476 aaPredicted RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 GRB14Q14449 540 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 ARL13BQ3SXY8 428 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 ZACNQ401N2 412 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 KIAA1755Q5JYT7 1200 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 INTS11Q5TA45 600 aaKnown RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 Q6ZVL8 140 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 TAS1R1Q7RTX1 841 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 RSPH3Q86UC2 560 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 ZNF444Q8N0Y2 327 aaPredicted RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 BCL6BQ8N143 479 aaPredicted RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 ATP11CQ8NB49 1132 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 GMCL1P1Q8NEA9 526 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 OR7D4Q8NG98 312 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 CYP2W1Q8TAV3 490 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 CASKIN2Q8WXE0 1202 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 TRIB2Q92519 343 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 USP6NLQ92738 828 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 NKD2Q969F2 451 aaPredicted RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 RILPL2Q969X0 211 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 CEP95Q96GE4 821 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 SPATC1LQ9H0A9 340 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 DIAPH3Q9NSV4 1193 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 SIDT1Q9NXL6 827 aaKnown RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 MTMR4Q9NYA4 1195 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
LSM5-203ENST00000409782 PCDHA5Q9Y5H7 936 aa6.92□□□□□ -1.3
LSM5-203ENST00000409782 TSPY2A6NKD2 308 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 CLCA1A8K7I4 914 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 F8W8V4 182 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 SYT5O00445 386 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 GASTP01350 101 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 HOXC6P09630 235 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 DHRS4L1P0CG22 281 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 HSPD1P10809 573 aaKnown RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 HARSP12081 509 aaKnown RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 NCAM1P13591 858 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 EEF1GP26641 437 aaKnown RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 CRHR1P34998 444 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 NCKAP1LP55160 1127 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 GEMIN4P57678 1058 aaKnown RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 SESN2P58004 480 aaPredicted RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 LINC00310P59036 64 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 CD83Q01151 205 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 CD69Q07108 199 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 ZNF385BQ569K4 471 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 MAP3K21Q5TCX8 1036 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 VPS53Q5VIR6 699 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 BEND5Q7L4P6 421 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 ZNF589Q86UQ0 364 aaPredicted RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 FAM90A1Q86YD7 464 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 LIX1LQ8IVB5 337 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 ABRAQ8N0Z2 381 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 U2AF1L4Q8WU68 220 aaKnown RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 TBC1D20Q96BZ9 403 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 WDR92Q96MX6 357 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 MOV10L1Q9BXT6 1211 aaKnown RBP6.91□□□□□ -1.3
LSM5-203ENST00000409782 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.91□□□□□ -1.3
LSM5-203ENST00000409782 MROH8Q9H579 483 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 LANCL2Q9NS86 450 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 TM7SF3Q9NS93 570 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 KCND1Q9NSA2 647 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 ADAMTS5Q9UNA0 930 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 MED16Q9Y2X0 877 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 VWA7Q9Y334 891 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 RAD50Q92878 1312 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 MYH4Q9Y623 1939 aa6.91□□□□□ -1.3
LSM5-203ENST00000409782 BRCA2P51587 3418 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 TRIM43BA6NCK2 446 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 F5H6K3 240 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 VWA5AO00534 786 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 EPB41L2O43491 1005 aaKnown RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 SGPL1O95470 568 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 SLC25A27O95847 323 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 IL18BPO95998 194 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 GAAP10253 952 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 KITP10721 976 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 CYP2B6P20813 491 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 SMARCA1P28370 1054 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms