RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 IL17RCQ8NAC3 791 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 TXNDC5Q8NBS9 432 aaKnown RBP15.55■□□□□ 0.08
CBX3-203ENST00000409747 JAKMIP2Q96AA8 810 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 CDK5RAP1Q96SZ6 601 aaKnown RBP15.55■□□□□ 0.08
CBX3-203ENST00000409747 TSG101Q99816 390 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 HOOK1Q9UJC3 728 aaKnown RBP15.55■□□□□ 0.08
CBX3-203ENST00000409747 TBC1D3BA6NDS4 549 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 HHLA1C9JL84 531 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 KLF8O95600 359 aaPredicted RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 TIE1P35590 1138 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 COBLL1Q53SF7 1204 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 GPRIN1Q7Z2K8 1008 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 MDGA1Q8NFP4 955 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 WHAMMQ8TF30 809 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 SPACA7Q96KW9 195 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 GSDMAQ96QA5 445 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 KLF16Q9BXK1 252 aaPredicted RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 DUSP16Q9BY84 665 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 TPSD1Q9BZJ3 242 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 RAB20Q9NX57 234 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 DNMT3LQ9UJW3 386 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 DCLK1O15075 740 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 SLC16A3O15427 465 aaKnown RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 TULP3O75386 442 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 SMC2O95347 1197 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 KIR2DL1P43626 348 aaPredicted RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 SLC8A3P57103 927 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 CREB5Q02930 508 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 PNOCQ13519 176 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 CCDC6Q16204 474 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 PPM1JQ5JR12 505 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 ZNF658Q5TYW1 1059 aaPredicted RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 PMS2CLQ68D20 193 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 CCDC186Q7Z3E2 898 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 TTC30AQ86WT1 665 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 SMYD4Q8IYR2 804 aaPredicted RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 FMR1NBQ8N0W7 255 aaPredicted RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 PHTF2Q8N3S3 785 aa15.54■□□□□ 0.08
CBX3-203ENST00000409747 XPO6Q96QU8 1125 aaKnown RBP15.54■□□□□ 0.08
CBX3-203ENST00000409747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.54■□□□□ 0.083e-9■□□□□ 9.1
CBX3-203ENST00000409747 NCOR2Q9Y618 2525 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 LAMA1P25391 3075 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 RALAP11233 206 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 RARGP13631 454 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 PLA2G4AP47712 749 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 KIF11P52732 1056 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 NUCB2P80303 420 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 MESP2Q0VG99 397 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 BYSLQ13895 437 aaKnown RBP15.53■□□□□ 0.08
CBX3-203ENST00000409747 ZNF394Q53GI3 561 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 PPP1R26Q5T8A7 1209 aaPredicted RBP15.53■□□□□ 0.08
CBX3-203ENST00000409747 GRAMD4Q6IC98 578 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 TMEM25Q86YD3 366 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 ZNF276Q8N554 614 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 NAT16Q8N8M0 369 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 TERB1Q8NA31 727 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 HEXIM2Q96MH2 286 aaKnown RBP15.53■□□□□ 0.08
CBX3-203ENST00000409747 CISHQ9NSE2 258 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 CLIC5Q9NZA1 410 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 BCCIPQ9P287 314 aaKnown RBP eCLIP15.53■□□□□ 0.08
CBX3-203ENST00000409747 WDR35Q9P2L0 1181 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 NAGPAQ9UK23 515 aa15.53■□□□□ 0.08
CBX3-203ENST00000409747 MYOFQ9NZM1 2061 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 A0A1W2PQH9 124 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 BCLAF3A2AJT9 711 aaKnown RBP15.52■□□□□ 0.08
CBX3-203ENST00000409747 SGK1O00141 431 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 CAVIN2O95810 425 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 TBX18O95935 607 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 PRCPP42785 496 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 PGFP49763 221 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 FKBP3Q00688 224 aaKnown RBP15.52■□□□□ 0.08
CBX3-203ENST00000409747 DCAF17Q5H9S7 520 aaPredicted RBP15.52■□□□□ 0.08
CBX3-203ENST00000409747 C10orf120Q5SQS8 335 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 C10orf76Q5T2E6 689 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 TCERG1LQ5VWI1 586 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 TMEM92Q6UXU6 159 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 SFTPA1Q8IWL2 248 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 ARHGAP18Q8N392 663 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 ZNF513Q8N8E2 541 aaPredicted RBP15.52■□□□□ 0.08
CBX3-203ENST00000409747 SEMA4DQ92854 862 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 TMEM176AQ96HP8 235 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 BBS2Q9BXC9 721 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 NMUR1Q9HB89 426 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 OSER1Q9NX31 292 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 MARK1Q9P0L2 795 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 USP3Q9Y6I4 520 aa15.52■□□□□ 0.08
CBX3-203ENST00000409747 NEDD8-MDP1E9PL57 170 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 CACNG3O60359 315 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 GREM1O60565 184 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 ADRB1P08588 477 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 CHRM1P11229 460 aaPredicted RBP15.51■□□□□ 0.07
CBX3-203ENST00000409747 YWHAEP62258 255 aaKnown RBP15.51■□□□□ 0.07
CBX3-203ENST00000409747 LRRC63Q05C16 580 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 STPG1Q5TH74 334 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 CYP2U1Q7Z449 544 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 OLIG1Q8TAK6 271 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 SMARCE1Q969G3 411 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 WBP2Q969T9 261 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 EEF2KMTQ96G04 330 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms