RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FAM131BQ86XD5 332 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 PRELID2Q8N945 189 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 C1orf54Q8WWF1 131 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 PIK3R5Q8WYR1 880 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 SLC2A13Q96QE2 648 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
CHMP3-204ENST00000409727 AAASQ9NRG9 546 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 AMACRQ9UHK6 382 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 INSL6Q9Y581 213 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC188H7C350 402 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 TNFRSF10BO14763 440 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 RAD51CO43502 376 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 TLL1O43897 1013 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 URODP06132 367 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 GLI1P08151 1106 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 KDELR1P24390 212 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 PGFP49763 221 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 CDH6P55285 790 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 USP46P62068 366 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 DYNLT1P63172 113 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 HTRA4P83105 476 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 DSG1Q02413 1049 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 KRT81Q14533 505 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 OTUD1Q5VV17 481 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 SLC8B1Q6J4K2 584 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 DDX53Q86TM3 631 aaKnown RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 NUP93Q8N1F7 819 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC185Q8N715 623 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 SPPL2BQ8TCT7 592 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 GIPC2Q8TF65 315 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 ATG4AQ8WYN0 398 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 HERVK_113Q902F9 699 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 MAGOHBQ96A72 148 aaKnown RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 HAUS1Q96CS2 278 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 C8orf48Q96LL4 319 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 CLSTN3Q9BQT9 956 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 SNRNP25Q9BV90 132 aaKnown RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 USP3Q9Y6I4 520 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 KIAA1671Q9BY89 1806 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 C3orf70A6NLC5 250 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 FSCN2O14926 492 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 FGF18O76093 207 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 CDKN2BP42772 138 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 MAGEA11P43364 429 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 YWHAGP61981 247 aaKnown RBP eCLIP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 KRT17Q04695 432 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 MMRN1Q13201 1228 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 MTMR3Q13615 1198 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 SIX1Q15475 284 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 CA9Q16790 459 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 TFDP3Q5H9I0 405 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 IRGQQ8WZA9 623 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 CENPIQ92674 756 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 NPY6RQ99463 290 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 HERC2P3Q9BVR0 1158 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 OXCT2Q9BYC2 517 aaPredicted RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 MAGEB5Q9BZ81 275 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 FAM204AQ9H8W3 233 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 TMPRSS4Q9NRS4 437 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 DMGDHQ9UI17 866 aaKnown RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 NUDT5Q9UKK9 219 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
CHMP3-204ENST00000409727 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
CHMP3-204ENST00000409727 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 A0A1W2PQH9 124 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 ZSCAN5CA6NGD5 496 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-204ENST00000409727 PHF2O75151 1096 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 HEXIM1O94992 359 aaKnown RBP12.98□□□□□ -0.33
CHMP3-204ENST00000409727 HAPLN1P10915 354 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-204ENST00000409727 RDXP35241 583 aaKnown RBP12.98□□□□□ -0.33
CHMP3-204ENST00000409727 PPM1AP35813 382 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 VSNL1P62760 191 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 PPP6R3Q5H9R7 873 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-204ENST00000409727 BTBD8Q5XKL5 378 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 TTC27Q6P3X3 843 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 FBXO38Q6PIJ6 1188 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 STRADAQ7RTN6 431 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 KLHL23Q8NBE8 558 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 RAD9AQ99638 391 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 DHX35Q9H5Z1 703 aaKnown RBP12.98□□□□□ -0.33
CHMP3-204ENST00000409727 PIGVQ9NUD9 493 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 DDIT4Q9NX09 232 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 MAGED2Q9UNF1 606 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-204ENST00000409727 PATJQ8NI35 1801 aa12.98□□□□□ -0.33
CHMP3-204ENST00000409727 ESYT3A0FGR9 886 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC85CA6NKD9 419 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 TTI1O43156 1089 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 TJP3O95049 919 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 LINC00271P0C7V0 271 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 KCNJ1P48048 391 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 COPS2P61201 443 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 RBM10P98175 930 aaKnown RBP12.97□□□□□ -0.33
CHMP3-204ENST00000409727 GUCY2DQ02846 1103 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 SMARCB1Q12824 385 aa12.97□□□□□ -0.33
CHMP3-204ENST00000409727 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms