RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SCINQ9Y6U3 715 aa17.33■□□□□ 0.36
TSPAN4-208ENST00000409531 DENND4CQ5VZ89 1909 aa17.33■□□□□ 0.36
TSPAN4-208ENST00000409531 NCANO14594 1321 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 FAM92AA1XBS5 289 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 PIK3R2O00459 728 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 PAPSS1O43252 624 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 FGF19O95750 216 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 TMEM253P0C7T8 217 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 ABCB4P21439 1286 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 PPP3CCP48454 512 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 EPHA5P54756 1037 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 SLC6A3Q01959 620 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 TDGQ13569 410 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 MTMR3Q13615 1198 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 SLC5A9Q2M3M2 681 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 HS1BP3Q53T59 392 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 EFHC1Q5JVL4 640 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 PRSS36Q5K4E3 855 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 FAM183BPQ6ZVS7 135 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 PDZD4Q76G19 769 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 KIAA1328Q86T90 577 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 SCUBE3Q8IX30 993 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 UBALD2Q8IYN6 164 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 HS6ST3Q8IZP7 471 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 C3orf20Q8ND61 904 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 ZNF830Q96NB3 372 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 MRPL47Q9HD33 250 aaKnown RBP17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 ASAH2Q9NR71 780 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 CNOT8Q9UFF9 292 aaKnown RBP17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 HCN4Q9Y3Q4 1203 aa17.32■□□□□ 0.36
TSPAN4-208ENST00000409531 OBSL1O75147 1896 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 FAM170AA1A519 330 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 ANHXE9PGG2 379 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 GABBR2O75899 941 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 GLI1P08151 1106 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 CCDC175P0C221 793 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 USP17L7P0C7H9 530 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 HMGA1P17096 107 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 PSEN1P49768 467 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 VAV2P52735 878 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 DAOAP59103 153 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 USP46P62068 366 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 C2CD6Q53TS8 623 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 TMEM31Q5JXX7 168 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 OLFML1Q6UWY5 402 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 TRIM67Q6ZTA4 783 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 MON1AQ86VX9 555 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 NPAS3Q8IXF0 933 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 ACRBPQ8NEB7 543 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 LRRC3Q9BY71 257 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 THAP2Q9H0W7 228 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 C11orf16Q9NQ32 467 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 TLR8Q9NR97 1041 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 PARVAQ9NVD7 372 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 ASNSD1Q9NWL6 643 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 GDE1Q9NZC3 331 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 TJP2Q9UDY2 1190 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 ADGRG1Q9Y653 693 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 ANAPC1Q9H1A4 1944 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
TSPAN4-208ENST00000409531 FAM86C2PA6NEL3 165 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 HSF2BPO75031 334 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 MYL4P12829 197 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 RRM1P23921 792 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 CDC25CP30307 473 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 CCR2P41597 374 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 TAF10Q12962 218 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 FAM102AQ5T9C2 384 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 DNAJC24Q6P3W2 148 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 SLC26A9Q7LBE3 791 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 SLC44A3Q8N4M1 653 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 STKLD1Q8NE28 680 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 RSAD2Q8WXG1 361 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 ING5Q8WYH8 240 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 FAM149B1Q96BN6 582 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 TCEAL4Q96EI5 215 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 GCNAQ96QF7 691 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 DESI2Q9BSY9 194 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 SELENOOQ9BVL4 669 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 TRPM5Q9NZQ8 1165 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 DOCK8Q8NF50 2099 aa17.3■□□□□ 0.36
TSPAN4-208ENST00000409531 GOLGA8SH3BPF8 625 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 LTFP02788 710 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 CYP1A2P05177 515 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 YWHAZP63104 245 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 SIGLEC14Q08ET2 396 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 PLEKHA7Q6IQ23 1121 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 MTSS1LQ765P7 747 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 ARCQ7LC44 396 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 DNAAF5Q86Y56 855 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 RHOT2Q8IXI1 618 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 CLEC4CQ8WTT0 213 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 PACSIN1Q9BY11 444 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 UVRAGQ9P2Y5 699 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 MYO1AQ9UBC5 1043 aa17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 REXO2Q9Y3B8 237 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
TSPAN4-208ENST00000409531 TRIOO75962 3097 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 SIGLEC16A6NMB1 481 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms