RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 AP1G2O75843 785 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 B3GAT3O94766 335 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 PAN2Q504Q3 1202 aaKnown RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 STRADAQ7RTN6 431 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 VSIG1Q86XK7 387 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 TAB3Q8N5C8 712 aaPredicted RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 PQLC3Q8N755 202 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 PCDH19Q8TAB3 1148 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 BCAS4Q8TDM0 211 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 PRCCQ92733 491 aaPredicted RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 UBN1Q9NPG3 1134 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 AP4E1Q9UPM8 1137 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 I3L4J1 428 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 DAB1O75553 588 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 ODC1P11926 461 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 STIP1P31948 543 aaKnown RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 NDUFV1P49821 464 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 TKTL1P51854 596 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 YWHAZP63104 245 aaKnown RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 SLC25A52Q3SY17 297 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 DCAF6Q58WW2 860 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 MFSD5Q6N075 450 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 CENPUQ71F23 418 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 FAM35AQ86V20 835 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 PCED1BQ96HM7 432 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 SERPINB12Q96P63 405 aa21.56■■□□□ 1.04
USP39-203ENST00000409470 CNOT10Q9H9A5 744 aaKnown RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 CWC15Q9P013 229 aaKnown RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 FARP1Q9Y4F1 1045 aaPredicted RBP21.56■■□□□ 1.04
USP39-203ENST00000409470 GOLGA8MH3BSY2 632 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 CYP2F1P24903 491 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 PCSK1P29120 753 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 L1CAMP32004 1257 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 GRIK3Q13003 919 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 DPYSL2Q16555 572 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 SLC9A4Q6AI14 798 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 METTL23Q86XA0 190 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 CCDC185Q8N715 623 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 CPT1BQ92523 772 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 CCDC77Q9BR77 488 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 ZNF487B1APH4 448 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 TOMM70O94826 608 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 MYCBPAPQ8TBZ2 947 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 FAF2Q96CS3 445 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 TTC25Q96NG3 672 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 SELENOSQ9BQE4 189 aa21.55■■□□□ 1.04
USP39-203ENST00000409470 MOXD2PA6NHM9 499 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 NOS2P35228 1153 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 RABGGTBP53611 331 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 TUSC3Q13454 348 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 HP1BP3Q5SSJ5 553 aaPredicted RBP21.54■■□□□ 1.04
USP39-203ENST00000409470 FAM131BQ86XD5 332 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 ECHDC2Q86YB7 292 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 HASPINQ8TF76 798 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 TRPV6Q9H1D0 765 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 NRDE2Q9H7Z3 1164 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 STAP1Q9ULZ2 295 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 PTCH2Q9Y6C5 1203 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 SQORQ9Y6N5 450 aa21.54■■□□□ 1.04
USP39-203ENST00000409470 CKBP12277 381 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 BRCC3P46736 316 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 BASP1P80723 227 aaKnown RBP21.53■■□□□ 1.04
USP39-203ENST00000409470 PDIA2Q13087 525 aaKnown RBP21.53■■□□□ 1.04
USP39-203ENST00000409470 STAT4Q14765 748 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 HIF1AQ16665 826 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 ANKRD22Q5VYY1 191 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 ZBED8Q8IZ13 594 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 KCTD15Q96SI1 283 aaPredicted RBP21.53■■□□□ 1.04
USP39-203ENST00000409470 SMOQ99835 787 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 EPN3Q9H201 632 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 CREBZFQ9NS37 354 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 CALCOCO1Q9P1Z2 691 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.53■■□□□ 1.04
USP39-203ENST00000409470 SYNJ2BP-COX16A0A087WUM0 186 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 FBXO21O94952 628 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 ABHD2P08910 425 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 ATP5DP30049 168 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 NRLP54845 237 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 FASTKD3Q14CZ7 662 aaKnown RBP21.53■■□□□ 1.04
USP39-203ENST00000409470 FOXR1Q6PIV2 292 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 TAOK1Q7L7X3 1001 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 NAT8LQ8N9F0 302 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 PXYLP1Q8TE99 480 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 KCNK16Q96T55 309 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 CFHR5Q9BXR6 569 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 MAGEB5Q9BZ81 275 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 ULBP1Q9BZM6 244 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 COX16Q9P0S2 106 aa21.53■■□□□ 1.04
USP39-203ENST00000409470 TDRD15B5MCY1 1934 aaKnown RBP21.52■■□□□ 1.04
USP39-203ENST00000409470 A0A087WUV0 522 aaPredicted RBP21.52■■□□□ 1.04
USP39-203ENST00000409470 KCNN4O15554 427 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 TCEA3O75764 348 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 MAP3K6O95382 1288 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 ZBED1O96006 694 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 ZFXP17010 805 aaPredicted RBP21.52■■□□□ 1.04
USP39-203ENST00000409470 ARL4CP56559 192 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 CCDC38Q502W7 563 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 TNFAIP8L3Q5GJ75 292 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 MDM1Q8TC05 714 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 SMARCD1Q96GM5 515 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms