RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TTLL2Q9BWV7 592 aa17.61■□□□□ 0.41
SSB-202ENST00000409333 NMUR1Q9HB89 426 aa17.61■□□□□ 0.41
SSB-202ENST00000409333 OSER1Q9NX31 292 aa17.61■□□□□ 0.41
SSB-202ENST00000409333 CALCOCO1Q9P1Z2 691 aa17.61■□□□□ 0.41
SSB-202ENST00000409333 C2orf16Q68DN1 1984 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 REV3LO60673 3130 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 A0A1W2PQH9 124 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 RFXAPO00287 272 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 CAPN9O14815 690 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 SRGAP2O75044 1071 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 URI1O94763 535 aaPredicted RBP17.6■□□□□ 0.41
SSB-202ENST00000409333 NCAM1P13591 858 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 CXCR5P32302 372 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 CTNNA1P35221 906 aaKnown RBP17.6■□□□□ 0.41
SSB-202ENST00000409333 NOS2P35228 1153 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 SSR1P43307 286 aaKnown RBP17.6■□□□□ 0.41
SSB-202ENST00000409333 TAF10Q12962 218 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 ADGRD2Q7Z7M1 963 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 FAM172AQ8WUF8 416 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 TBCBQ99426 244 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 COMMD8Q9NX08 183 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 SNX12Q9UMY4 172 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 NOTCH4Q99466 2003 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
SSB-202ENST00000409333 PER2O15055 1255 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 CLASP2O75122 1294 aaKnown RBP17.59■□□□□ 0.41
SSB-202ENST00000409333 C8AP07357 584 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 HMGA1P17096 107 aaKnown RBP17.59■□□□□ 0.41
SSB-202ENST00000409333 GJC1P36383 396 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 SULT1E1P49888 294 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 PDE12Q6L8Q7 609 aaKnown RBP17.59■□□□□ 0.41
SSB-202ENST00000409333 ALG3Q92685 438 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 NT5C3BQ969T7 300 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 OSBPL9Q96SU4 736 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 SAR1BQ9Y6B6 198 aa17.59■□□□□ 0.41
SSB-202ENST00000409333 MIF4GDA9UHW6 222 aaKnown RBP17.58■□□□□ 0.41
SSB-202ENST00000409333 KCNK3O14649 394 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 RNF8O76064 485 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 EPCAMP16422 314 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 CTNNA2P26232 953 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 ATXN1P54253 815 aaKnown RBP17.58■□□□□ 0.41
SSB-202ENST00000409333 EPHB3P54753 998 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 HDAC4P56524 1084 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 SLC25A11Q02978 314 aaKnown RBP17.58■□□□□ 0.41
SSB-202ENST00000409333 ACAP1Q15027 740 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 SLC25A52Q3SY17 297 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 DCAF12L1Q5VU92 463 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 BTBD8Q5XKL5 378 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 TXNRD3NBQ6F5E7 133 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 RBM23Q86U06 439 aaKnown RBP17.58■□□□□ 0.41
SSB-202ENST00000409333 MON1AQ86VX9 555 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 ADAM32Q8TC27 787 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 CENPIQ92674 756 aaPredicted RBP17.58■□□□□ 0.41
SSB-202ENST00000409333 NPY6RQ99463 290 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 LMAN2LQ9H0V9 348 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 ABCC13Q9NSE7 274 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 STAP1Q9ULZ2 295 aa17.58■□□□□ 0.41
SSB-202ENST00000409333 ZNF185O15231 689 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 CSH1P0DML2 217 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 CSH2P0DML3 217 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 MIPP30301 263 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 PEX5P50542 639 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 MLLT1Q03111 559 aaPredicted RBP17.58■□□□□ 0.4
SSB-202ENST00000409333 PLD1Q13393 1074 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 VEPH1Q14D04 833 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 CCDC149Q6ZUS6 474 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 COG1Q8WTW3 980 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 PEBP4Q96S96 227 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 MAN1C1Q9NR34 630 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 PCSK1NQ9UHG2 260 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 NUDT5Q9UKK9 219 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 PCDHA3Q9Y5H8 950 aa17.58■□□□□ 0.4
SSB-202ENST00000409333 HELZP42694 1942 aaKnown RBP17.57■□□□□ 0.4
SSB-202ENST00000409333 SZT2Q5T011 3432 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 SYNJ2BP-COX16A0A087WUM0 186 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 CCDC66A2RUB6 948 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 M0QYT0 321 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 PSTPIP1O43586 416 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 IL1R2P27930 398 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 TAF12Q16514 161 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 ATP13A4Q4VNC1 1196 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 BNIPLQ7Z465 357 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 DNAJB7Q7Z6W7 309 aaPredicted RBP17.57■□□□□ 0.4
SSB-202ENST00000409333 RHOT1Q8IXI2 618 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 SLC22A17Q8WUG5 538 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 PSMG2Q969U7 264 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 ACSF2Q96CM8 615 aaPredicted RBP17.57■□□□□ 0.4
SSB-202ENST00000409333 MYRFLQ96LU7 910 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 SLITRK1Q96PX8 696 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 TRIM62Q9BVG3 475 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 ZWILCHQ9H900 591 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 TLR8Q9NR97 1041 aaKnown RBP17.57■□□□□ 0.4
SSB-202ENST00000409333 KLHL11Q9NVR0 708 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 COX16Q9P0S2 106 aa17.57■□□□□ 0.4
SSB-202ENST00000409333 LRG1P02750 347 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 ZDHHC11BP0C7U3 371 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 PCK1P35558 622 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 SMTNL2Q2TAL5 461 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 CYP4V2Q6ZWL3 525 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms