RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 EFCAB12Q6NXP0 572 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 RHBDF2Q6PJF5 856 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 C4orf50Q6ZRC1 276 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 TP53INP2Q8IXH6 220 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 C3orf20Q8ND61 904 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 ICA1LQ8NDH6 482 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 PHC3Q8NDX5 983 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 CELF6Q96J87 481 aaKnown RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 FDXACB1Q9BRP7 624 aaPredicted RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 WDR55Q9H6Y2 383 aaPredicted RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 GOLGA2P5Q9HBQ8 144 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 ADA2Q9NZK5 511 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 KLHL8Q9P2G9 620 aaPredicted RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 HESX1Q9UBX0 185 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 TMEM191CA6NGB0 347 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 SPTLC1O15269 473 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 MICAL2O94851 1124 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 C4BPAP04003 597 aaKnown RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 CSH1P0DML2 217 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 CSH2P0DML3 217 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 SRGAP2BP0DMP2 458 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 ARSAP15289 507 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 MGAT1P26572 445 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 SFNP31947 248 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 CDKN2BP42772 138 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 GMPSP49915 693 aaPredicted RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 NDST1P52848 882 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 ITKQ08881 620 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 KIZQ2M2Z5 673 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 FASTKD1Q53R41 847 aaKnown RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 TLDC1Q6P9B6 456 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 PAOXQ6QHF9 649 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 HPS6Q86YV9 775 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 SLC9A9Q8IVB4 645 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 KATNAL2Q8IYT4 538 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 MORC4Q8TE76 937 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 OMDQ99983 421 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 OXCT2Q9BYC2 517 aaPredicted RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 EBF2Q9HAK2 575 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 APOBEC2Q9Y235 224 aaKnown RBP8.64□□□□□ -1.03
SNX13-201ENST00000409076 SNX10Q9Y5X0 201 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 BRCA2P51587 3418 aa8.64□□□□□ -1.03
SNX13-201ENST00000409076 PHGDHO43175 533 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 OR6B1O95007 311 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 MOCS2O96007 188 aaPredicted RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 CCDC130P13994 396 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 SP100P23497 879 aaPredicted RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 NUDT2P50583 147 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 GCNT1Q02742 428 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 HIC1Q14526 733 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 MORF4L2Q15014 288 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 MMEL1Q495T6 779 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 ATF7IP2Q5U623 682 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 RNF43Q68DV7 783 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 JADE1Q6IE81 842 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 RWDD4Q6NW29 188 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 IFNEQ86WN2 208 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 SH3TC2Q8TF17 1288 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 ZNF669Q96BR6 464 aaPredicted RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 GRAMD1AQ96CP6 724 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 MRPL4Q9BYD3 311 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 ELP3Q9H9T3 547 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 PDGFCQ9NRA1 345 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 GTSE1Q9NYZ3 720 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 A8MXQ7 604 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 P4HA2O15460 535 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 KLRC2P26717 231 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 PAPOLAP51003 745 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 MRPS22P82650 360 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 SLC15A2Q16348 729 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 NRF1Q16656 503 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 ARHGAP24Q8N264 748 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 NRG4Q8WWG1 115 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 CGRRF1Q99675 332 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 KLC2Q9H0B6 622 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 DCLRE1BQ9H816 532 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 ACAD9Q9H845 621 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 KCND2Q9NZV8 630 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 TSPAN16Q9UKR8 245 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 PLIN4Q96Q06 1357 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 LRP5O75197 1615 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 APOL1O14791 398 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 WDR46O15213 610 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 PAPSS1O43252 624 aaPredicted RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 ZWINTO95229 277 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 KRT7P08729 469 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 SUPT20HL2P0C7V6 817 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 MMP8P22894 467 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 CDK16Q00536 496 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 LAMTOR4Q0VGL1 99 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 CYP1B1Q16678 543 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 SUPT20HL1Q3ZLR7 823 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 DCAF6Q58WW2 860 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 CYP2R1Q6VVX0 501 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 EIF1ADQ8N9N8 165 aaKnown RBP8.63□□□□□ -1.03
SNX13-201ENST00000409076 STKLD1Q8NE28 680 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 HASPINQ8TF76 798 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 CATSPER2Q96P56 530 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 PCDH9Q9HC56 1237 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms