RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 TRNP1Q6NT89 227 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 SCYL2Q6P3W7 929 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 KCNT2Q6UVM3 1135 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 C4orf22Q6V702 233 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 JAMLQ86YT9 394 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 ZNF276Q8N554 614 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 RAPGEF5Q92565 580 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 FAF2Q96CS3 445 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 VWCEQ96DN2 955 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 TMEM169Q96HH4 297 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 RNF157Q96PX1 679 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 KCNK16Q96T55 309 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 FOXP3Q9BZS1 431 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 EPC1Q9H2F5 836 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 ZWILCHQ9H900 591 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 TMLHEQ9NVH6 421 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 SPG21Q9NZD8 308 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 MTRRQ9UBK8 725 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 PCSK1NQ9UHG2 260 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 SCML2Q9UQR0 700 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 NR2E1Q9Y466 385 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 VWA8A3KMH1 1905 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 FAM92AA1XBS5 289 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 CFAP69A5D8W1 941 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 SMAPO00193 183 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 PIK3R2O00459 728 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 TTI1O43156 1089 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 GRAP2O75791 330 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 UPP2O95045 317 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 SOD2P04179 222 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 CSF2RAP15509 400 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 ARL4AP40617 200 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 SULT1E1P49888 294 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 CDH6P55285 790 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 SLC7A5Q01650 507 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 DEUP1Q05D60 604 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 SCAPQ12770 1279 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 BYSLQ13895 437 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 BTG3Q14201 252 aaPredicted RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 KRT81Q14533 505 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 C15orf59Q2T9L4 293 aaPredicted RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 BRMS1LQ5PSV4 323 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 BSPRYQ5W0U4 402 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 KIAA1841Q6NSI8 718 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 AADACL2Q6P093 401 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 PSRC1Q6PGN9 363 aaPredicted RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 DDX53Q86TM3 631 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 CEP57Q86XR8 500 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 ZDHHC14Q8IZN3 488 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 MREGQ8N565 214 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 PHOSPHO2Q8TCD6 241 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 AENQ8WTP8 325 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 LRRC45Q96CN5 670 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 HAUS1Q96CS2 278 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 PIWIL1Q96J94 861 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 CDK5RAP1Q96SZ6 601 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 MTIF3Q9H2K0 278 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 RC3H2Q9HBD1 1191 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 PRDM5Q9NQX1 630 aaPredicted RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 OLA1Q9NTK5 396 aaKnown RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 CLIC5Q9NZA1 410 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 WHRNQ9P202 907 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 COL4A4P53420 1690 aaPredicted RBP10.75□□□□□ -0.69
SNORD88C-201ENST00000408061 TCRBV7S2A1N4TA0A589 114 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 YJEFN3A6XGL0 299 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 E7ENQ6 273 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 PI4K2BG5E9Z4 385 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 M0QYT0 321 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 MAP2K7O14733 419 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 LIASO43766 372 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 CST8O60676 142 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 C1RP00736 705 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 FYNP06241 537 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 USP17L7P0C7H9 530 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 HAPLN1P10915 354 aaPredicted RBP10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 SLC2A3P11169 496 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 NCAM1P13591 858 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 CPB1P15086 417 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 TCF4P15884 667 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 CYP2F1P24903 491 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 L1CAMP32004 1257 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 GJC1P36383 396 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 CXCR3P49682 368 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 NDUFV1P49821 464 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 GATMP50440 423 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 VCPP55072 806 aaKnown RBP10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 DSG1Q02413 1049 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 KRT17Q04695 432 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 CALCOCO2Q13137 446 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 XRCC4Q13426 336 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 PTK6Q13882 451 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 DPYSL3Q14195 570 aa10.74□□□□□ -0.69
SNORD88C-201ENST00000408061 PPP1R7Q15435 360 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms