RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 POLR3FQ9H1D9 316 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-205ENST00000404914 SLC17A6Q9P2U8 582 aa16.12■□□□□ 0.17
ATG4B-205ENST00000404914 FKBP6O75344 327 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 PROCP04070 461 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 CALB1P05937 261 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 PDK3Q15120 406 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 PGM5Q15124 567 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 TRIP10Q15642 601 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 MROH9Q5TGP6 573 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 SCARA5Q6ZMJ2 495 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 POLNQ7Z5Q5 900 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 HPS6Q86YV9 775 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 ADGRF2Q8IZF7 708 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 GCNAQ96QF7 691 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
ATG4B-205ENST00000404914 TBC1D22BQ9NU19 505 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 TCEAL9Q9UHQ7 104 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 TTLL13PA6NNM8 815 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 DEUP1Q05D60 604 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 GK3PQ14409 553 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATG4B-205ENST00000404914 RABGAP1LQ5R372 815 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 VWA5B1Q5TIE3 1220 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 DENND1BQ6P3S1 775 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 CRLF3Q8IUI8 442 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 HIC2Q96JB3 615 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 OLFM3Q96PB7 478 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 CALN1Q9BXU9 219 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 POPDC2Q9HBU9 364 aa16.11■□□□□ 0.17
ATG4B-205ENST00000404914 CAPN8A6NHC0 703 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 VILLO15195 856 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 GSRP00390 522 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 ASLP04424 464 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 SNRPAP09012 282 aaKnown RBP16.1■□□□□ 0.17
ATG4B-205ENST00000404914 RAG1P15918 1043 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 ARRB2P32121 409 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 CAP2P40123 477 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 ORC1Q13415 861 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 SMAD1Q15797 465 aaKnown RBP16.1■□□□□ 0.17
ATG4B-205ENST00000404914 MMEL1Q495T6 779 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 SH3PXD2AQ5TCZ1 1133 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 ANGEL2Q5VTE6 544 aaKnown RBP16.1■□□□□ 0.17
ATG4B-205ENST00000404914 NIPA1Q7RTP0 329 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 NIPA2Q8N8Q9 360 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 DTNBP1Q96EV8 351 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 TARS2Q9BW92 718 aaKnown RBP16.1■□□□□ 0.17
ATG4B-205ENST00000404914 KLHL4Q9C0H6 718 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 IL1RAPL1Q9NZN1 696 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 CNTNAP2Q9UHC6 1331 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 TOM1L1O75674 476 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 ICAM1P05362 532 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 BPGMP07738 259 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 TNFSF9P41273 254 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 RPS6P62753 249 aaKnown RBP16.1■□□□□ 0.17
ATG4B-205ENST00000404914 TLR1Q15399 786 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 ADGRG6Q86SQ4 1221 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 UNC5BQ8IZJ1 945 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 NDUFAF2Q8N183 169 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 METTL25Q8N6Q8 603 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 TMEM143Q96AN5 459 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 FAF2Q96CS3 445 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 CCDC28BQ9BUN5 200 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 C1orf21Q9H246 121 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 XAB2Q9HCS7 855 aaKnown RBP16.1■□□□□ 0.17
ATG4B-205ENST00000404914 PDLIM7Q9NR12 457 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 UBAP1Q9NZ09 502 aa16.1■□□□□ 0.17
ATG4B-205ENST00000404914 C15orf38-AP3S2A0A0A6YYH1 394 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 LOC100653049A0A140TA62 436 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 H3BNX3 289 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 KRT34O76011 436 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 ITGA2BP08514 1039 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 PIM1P11309 404 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 AOC1P19801 751 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 RPL10AP62906 217 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 TAZQ16635 292 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 ATG16L1Q676U5 607 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 DARS2Q6PI48 645 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 PODNQ7Z5L7 613 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 ARPINQ7Z6K5 226 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 CAND1Q86VP6 1230 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 MPP5Q8N3R9 675 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 PEBP4Q96S96 227 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 RAB6BQ9NRW1 208 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 SEPT9Q9UHD8 586 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 DNAJC16Q9Y2G8 782 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 MYL6P60660 151 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 STX3Q13277 289 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 PGM2L1Q6PCE3 622 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 AAGABQ6PD74 315 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 TMEM35BQ8NCS4 154 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 STKLD1Q8NE28 680 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 DDX18Q9NVP1 670 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 ZC3H7BQ9UGR2 993 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 POMPQ9Y244 141 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 PDLIM1O00151 329 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 TFAP2AP05549 437 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 FOLH1Q04609 750 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 GRAMD1BQ3KR37 738 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms