RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 KCNA4P22459 653 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 BCAR1P56945 870 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 ARHGAP8P85298 464 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 ANGEL2Q5VTE6 544 aaKnown RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 JADE1Q6IE81 842 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 CES3Q6UWW8 571 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 CCNJLQ8IV13 435 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 ZBTB8OSQ8IWT0 167 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 NIPA2Q8N8Q9 360 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 E2F7Q96AV8 911 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 CYP4F11Q9HBI6 524 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 PACSIN3Q9UKS6 424 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 MTO1Q9Y2Z2 717 aaKnown RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 MFHAS1Q9Y4C4 1052 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 WDR81Q562E7 1941 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 SYNJ2BP-COX16A0A087WUM0 186 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 ARHGAP42A6NI28 874 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 LACTBL1A8MY62 500 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 HCRTO43612 131 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 POLE2P56282 527 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 TAP1Q03518 808 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 TREML2Q5T2D2 321 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 FAM183BPQ6ZVS7 135 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 SLC26A11Q86WA9 606 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.44□□□□□ -0.42
RBM39-206ENST00000403542 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
RBM39-206ENST00000403542 ZNF518BQ9C0D4 1074 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 ARHGEF4Q9NR80 690 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 COX16Q9P0S2 106 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 TTLL3Q9Y4R7 772 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 GPR25O00155 361 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 ZMPSTE24O75844 475 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 ADORA2AP29274 412 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 EPHB1P54762 984 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 RPL10AP62906 217 aaKnown RBP12.44□□□□□ -0.42
RBM39-206ENST00000403542 SLC25A3Q00325 362 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 SLC34A1Q06495 639 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 CAND1Q86VP6 1230 aaKnown RBP12.44□□□□□ -0.42
RBM39-206ENST00000403542 HACE1Q8IYU2 909 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 PLD5Q8N7P1 536 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 SMC1BQ8NDV3 1235 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 CMASQ8NFW8 434 aaPredicted RBP12.44□□□□□ -0.42
RBM39-206ENST00000403542 RPF1Q9H9Y2 349 aaKnown RBP12.44□□□□□ -0.42
RBM39-206ENST00000403542 PLAC1Q9HBJ0 212 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 LOC100653049A0A140TA62 436 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 KRT34O76011 436 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 METTL18O95568 372 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 RARBP10826 455 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 GNAT1P11488 350 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 CYP3A5P20815 502 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 OSBPP22059 807 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 ABCG1P45844 678 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 GTF2A2P52657 109 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 GBE1Q04446 702 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 KCNJ11Q14654 390 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 C1orf146Q5VVC0 180 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 C7orf31Q8N865 590 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 TEKT4Q8WW24 435 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 ALKBH8Q96BT7 664 aaKnown RBP12.44□□□□□ -0.42
RBM39-206ENST00000403542 MOCOSQ96EN8 888 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 PPP1R36Q96LQ0 422 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 TSC22D3Q99576 134 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 CXCL16Q9H2A7 254 aa12.44□□□□□ -0.42
RBM39-206ENST00000403542 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
RBM39-206ENST00000403542 KRT37O76014 449 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 PDE5AO76074 875 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 SNRPAP09012 282 aaKnown RBP12.43□□□□□ -0.42
RBM39-206ENST00000403542 DHRS4L1P0CG22 281 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 SP100P23497 879 aaPredicted RBP12.43□□□□□ -0.42
RBM39-206ENST00000403542 PTPN7P35236 360 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 NDST1P52848 882 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 SESN2P58004 480 aaPredicted RBP12.43□□□□□ -0.42
RBM39-206ENST00000403542 GRIK3Q13003 919 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 OLIG2Q13516 323 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 NOMO1Q15155 1222 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 TARBP2Q15633 366 aaKnown RBP12.43□□□□□ -0.42
RBM39-206ENST00000403542 VWA5B1Q5TIE3 1220 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 TTC39BQ5VTQ0 682 aaPredicted RBP12.43□□□□□ -0.42
RBM39-206ENST00000403542 ZPBP2Q6X784 338 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 UNC5AQ6ZN44 842 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 RIPOR1Q6ZS17 1223 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 SH2D5Q6ZV89 423 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 GSTCDQ8NEC7 633 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 FAM172AQ8WUF8 416 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 PYDC1Q8WXC3 89 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 CDT1Q9H211 546 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 TLE6Q9H808 572 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 RSAD1Q9HA92 442 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 USP29Q9HBJ7 922 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 ASNSD1Q9NWL6 643 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 PLLPQ9Y342 182 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 MED7O43513 233 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 ITM2AO43736 263 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 RFPL1O75677 317 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 GPD1P21695 349 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms